Detailed information NTG0275585

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: CSB68_RS19260
• Genome accession: NZ_CP027183
• Coordinates: 3939784..3940842 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain AR_0052
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3934784..3945842

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CSB68_RS19245 (CSB68_3863)	-	3935889..3936221 (+)	333	WP_000169594.1	hypothetical protein	-
CSB68_RS19250 (CSB68_3864)	-	3936224..3937048 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
CSB68_RS19255 (CSB68_3865)	ponA	3937066..3939621 (-)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
CSB68_RS19260 (CSB68_3866)	pilM	3939784..3940842 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
CSB68_RS19265 (CSB68_3867)	pilN	3940842..3941483 (+)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
CSB68_RS19270 (CSB68_3868)	pilO	3941480..3942220 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
CSB68_RS19275 (CSB68_3869)	pilP	3942231..3942758 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
CSB68_RS19280 (CSB68_3870)	pilQ	3942826..3944991 (+)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
CSB68_RS19285 (CSB68_3871)	aroK	3945003..3945572 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=275585 CSB68_RS19260 WP_002014066.1 3939784..3940842(+) (pilM) [Acinetobacter baumannii strain AR_0052]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=275585 CSB68_RS19260 WP_002014066.1 3939784..3940842(+) (pilM) [Acinetobacter baumannii strain AR_0052]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTAGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423