Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | CSB93_RS01450 | Genome accession | NZ_CP027169 |
| Coordinates | 8730..9287 (+) | Length | 185 a.a. |
| NCBI ID | WP_034081446.1 | Uniprot ID | E9KTN1 |
| Organism | Pseudomonas paraeruginosa strain AR_0356 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3730..14287
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSB93_RS01430 (CSB93_0007) | pilR | 5006..6343 (+) | 1338 | WP_033999343.1 | two-component system response regulator PilR | Regulator |
| CSB93_RS01435 (CSB93_0008) | thiO | 6389..7483 (-) | 1095 | WP_058146146.1 | glycine oxidase ThiO | - |
| CSB93_RS01440 (CSB93_0009) | - | 7618..8127 (+) | 510 | WP_003150026.1 | GspH/FimT family protein | - |
| CSB93_RS01445 (CSB93_0010) | - | 8233..8739 (+) | 507 | WP_012077308.1 | Tfp pilus assembly protein FimT/FimU | - |
| CSB93_RS01450 (CSB93_0011) | pilV | 8730..9287 (+) | 558 | WP_034081446.1 | type IV pilus modification protein PilV | Machinery gene |
| CSB93_RS01455 (CSB93_0012) | pilW | 9284..10108 (+) | 825 | WP_034081447.1 | type 4a pilus minor pilin PilW | - |
| CSB93_RS01460 (CSB93_0013) | pilX | 10105..10692 (+) | 588 | WP_034081449.1 | type 4a pilus minor pilin PilX | - |
| CSB93_RS01465 (CSB93_0014) | pilY1 | 10704..14171 (+) | 3468 | WP_053817771.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 19985.21 Da Isoelectric Point: 8.2269
>NTDB_id=275360 CSB93_RS01450 WP_034081446.1 8730..9287(+) (pilV) [Pseudomonas paraeruginosa strain AR_0356]
MLLKLPRKPLRESGFSLIEVLVALLLVSIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAVKDRLGCWAEQVKKELPGAADLLNSEFYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNPADSGADTSLCHYTLRVEP
MLLKLPRKPLRESGFSLIEVLVALLLVSIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAVKDRLGCWAEQVKKELPGAADLLNSEFYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNPADSGADTSLCHYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=275360 CSB93_RS01450 WP_034081446.1 8730..9287(+) (pilV) [Pseudomonas paraeruginosa strain AR_0356]
ATGCTATTGAAACTCCCGCGCAAACCGCTGCGCGAATCCGGCTTCAGCCTGATCGAAGTGCTGGTCGCCCTGCTGCTGGT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTGGAGCGCAACAAGG
CCGCGATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCAAGCCCCAAGGCCCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCCTCCTCCTGCACGCCATTGCCCGACGCGGT
GAAGGACCGCCTGGGCTGCTGGGCGGAACAGGTGAAGAAGGAATTGCCGGGAGCCGCGGACCTGCTGAACAGCGAGTTCT
ACATCTGCCGCAGTTCGAAGCCGGGCGATTGCGACGGCAAGGGCTCGATGCTGGAGATCCGCCTCGCCTGGCGCGGCAAG
CAGGGCGCCTGCGTCAACCCCGCCGACAGCGGCGCCGACACCTCCCTCTGCCATTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAACTCCCGCGCAAACCGCTGCGCGAATCCGGCTTCAGCCTGATCGAAGTGCTGGTCGCCCTGCTGCTGGT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTGGAGCGCAACAAGG
CCGCGATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCAAGCCCCAAGGCCCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCCTCCTCCTGCACGCCATTGCCCGACGCGGT
GAAGGACCGCCTGGGCTGCTGGGCGGAACAGGTGAAGAAGGAATTGCCGGGAGCCGCGGACCTGCTGAACAGCGAGTTCT
ACATCTGCCGCAGTTCGAAGCCGGGCGATTGCGACGGCAAGGGCTCGATGCTGGAGATCCGCCTCGCCTGGCGCGGCAAG
CAGGGCGCCTGCGTCAACCCCGCCGACAGCGGCGCCGACACCTCCCTCTGCCATTACACCCTCAGGGTCGAGCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
90.27 |
100 |
0.903 |