Detailed information NTG0027532

Bioinformatically predicted

Overview

• Name: treR
• Type: Regulator
• Locus tag: SSA_RS08515
• Genome accession: NC_009009
• Coordinates: 1742087..1742800 (+)
• Length: 237 a.a.
• NCBI ID: WP_033179202.1
• Uniprot ID: -
• Organism: Streptococcus sanguinis SK36
• Function: regulate expression of competence genes (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	1743565..1756789	1742087..1742800	flank	765

Gene organization within MGE regions

Location: 1742087..1756789

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSA_RS08515 (SSA_1753)	treR	1742087..1742800 (+)	714	WP_033179202.1	trehalose operon repressor	Regulator
SSA_RS08520 (SSA_1754)	-	1743215..1743556 (-)	342	WP_223311173.1	hypothetical protein	-
SSA_RS08525 (SSA_1755)	-	1743565..1743858 (-)	294	WP_011837335.1	hypothetical protein	-
SSA_RS08530 (SSA_1756)	-	1743867..1745381 (-)	1515	WP_011837336.1	hypothetical protein	-
SSA_RS08535 (SSA_1757)	-	1745372..1745980 (-)	609	WP_011837337.1	hypothetical protein	-
SSA_RS08540 (SSA_1758)	-	1746101..1746709 (-)	609	WP_011837338.1	hypothetical protein	-
SSA_RS11900	-	1746754..1747362 (-)	609	Protein_1665	hypothetical protein	-
SSA_RS08550 (SSA_1761)	-	1747527..1748867 (-)	1341	WP_011837341.1	hemolysin family protein	-
SSA_RS08555 (SSA_1762)	-	1749018..1750142 (-)	1125	WP_002894636.1	AI-2E family transporter	-
SSA_RS08560 (SSA_1763)	-	1750217..1751011 (+)	795	WP_011837342.1	ABC transporter ATP-binding protein	-
SSA_RS08565 (SSA_1764)	-	1751008..1752570 (+)	1563	WP_011837343.1	beta-carotene 15,15'-monooxygenase	-
SSA_RS08570 (SSA_2385)	-	1752682..1753056 (+)	375	WP_004193116.1	hypothetical protein	-
SSA_RS08575 (SSA_1765)	-	1753176..1753940 (+)	765	WP_011837344.1	class I SAM-dependent methyltransferase	-
SSA_RS11925	-	1754258..1754374 (-)	117	Protein_1672	IS200/IS605 family transposase	-
SSA_RS08580 (SSA_1766)	-	1754478..1755253 (-)	776	Protein_1673	ABC transporter permease	-
SSA_RS08585 (SSA_1767)	-	1755240..1756193 (-)	954	WP_011837346.1	ABC transporter ATP-binding protein	-
SSA_RS08590 (SSA_1768)	-	1756193..1756789 (-)	597	WP_011837347.1	TetR/AcrR family transcriptional regulator	-

Sequence

Protein

• Length: 237 a.a.
• Molecular weight: 27828.75 Da
• Isoelectric Point: 7.3925

>NTDB_id=27532 SSA_RS08515 WP_033179202.1 1742087..1742800(+) (treR) [Streptococcus sanguinis SK36]
MKKYKQLFKQIEKDILDERYAVGDFLPSEHQLTEDYQVSRDTVRKALALLQEEGLIEKVRGQGSKVIKHEQFDFPVSKLT
SYQEVVKQNNMQSKTNVVSLEKITVDQKLSDITGFLPYRLVWRIVRQRVVDQVASVLDIDYLDKGIVPDLTREIAEQSIY
AYLENDLKLNIDYAKKEFTIDHANDRDKILMDLGKDQQVVSVKSQVYLADGRQFQYTESRHKLDKFRFVDFAKRQKE

Nucleotide

• Length: 714 bp

>NTDB_id=27532 SSA_RS08515 WP_033179202.1 1742087..1742800(+) (treR) [Streptococcus sanguinis SK36]
ATGAAGAAATATAAACAATTATTCAAACAAATTGAGAAAGATATTTTAGACGAGCGTTATGCAGTCGGGGACTTCTTGCC
CAGCGAACACCAGCTGACAGAAGACTACCAGGTCAGCCGCGACACTGTTCGCAAGGCTCTGGCGCTGCTGCAAGAAGAAG
GATTGATTGAAAAAGTCCGCGGACAGGGTTCCAAAGTCATCAAGCATGAACAGTTTGACTTTCCTGTGTCTAAGCTGACC
AGCTATCAAGAAGTAGTCAAGCAGAATAATATGCAGTCCAAAACCAATGTTGTCAGCTTGGAAAAGATTACCGTAGATCA
GAAACTGTCCGACATCACTGGCTTCCTTCCCTACCGACTAGTTTGGCGAATCGTCCGTCAGCGCGTTGTAGACCAAGTCG
CCTCTGTATTAGATATTGACTATTTAGACAAGGGCATCGTCCCTGACTTGACAAGGGAAATCGCTGAGCAGTCCATTTAT
GCCTATTTGGAAAATGATTTAAAGCTCAATATCGATTATGCCAAGAAGGAATTTACCATTGACCACGCCAATGACCGAGA
CAAGATTCTCATGGACCTAGGCAAGGACCAGCAAGTCGTCTCTGTAAAGTCTCAGGTCTATCTGGCAGACGGCCGCCAGT
TTCAATATACTGAGAGCCGGCACAAGCTAGACAAATTTCGCTTTGTGGATTTTGCTAAGCGTCAGAAAGAATAA

Domains

Predicted by InterproScan.

• UTRA domain (UTRA) (90-227)

• Bacterial regulatory proteins, gntR family (GntR) (3-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
treR	Streptococcus mutans UA159	59.916	100	0.599