Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   SSA_RS02405 Genome accession   NC_009009
Coordinates   464955..466712 (+) Length   585 a.a.
NCBI ID   WP_011836527.1    Uniprot ID   A3CL55
Organism   Streptococcus sanguinis SK36     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 459955..471712
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSA_RS02380 (SSA_0457) scrK 460803..461702 (+) 900 WP_002907200.1 fructokinase ScrK -
  SSA_RS02385 (SSA_0458) - 461749..462159 (+) 411 WP_011836525.1 peptide deformylase -
  SSA_RS02390 (SSA_0459) - 462238..462573 (+) 336 WP_002903845.1 hypothetical protein -
  SSA_RS02395 (SSA_0460) - 462748..463206 (+) 459 WP_002913878.1 MarR family winged helix-turn-helix transcriptional regulator -
  SSA_RS02400 (SSA_0461) rcrP 463199..464965 (+) 1767 WP_011836526.1 ABC transporter ATP-binding protein Regulator
  SSA_RS02405 (SSA_0462) rcrQ 464955..466712 (+) 1758 WP_011836527.1 ABC transporter ATP-binding protein Regulator
  SSA_RS02410 (SSA_0463) - 467005..468363 (+) 1359 WP_002917659.1 cobyrinate a,c-diamide synthase -
  SSA_RS02415 (SSA_0464) cbiB 468365..469315 (+) 951 WP_002898268.1 adenosylcobinamide-phosphate synthase CbiB -
  SSA_RS02420 (SSA_0465) - 469325..470023 (+) 699 WP_002910554.1 cobalt-precorrin-8 methylmutase -
  SSA_RS02425 (SSA_0466) - 470024..470728 (+) 705 WP_002911806.1 cobalt-precorrin-8 methylmutase -

Sequence

Protein


Download         Length: 585 a.a.        Molecular weight: 64407.40 Da        Isoelectric Point: 4.9292

>NTDB_id=27509 SSA_RS02405 WP_011836527.1 464955..466712(+) (rcrQ) [Streptococcus sanguinis SK36]
MENKKPSLFSQIRPYLKGFQLPLALAFVGAVLSNIITVYGPIKLKEITNLISDGLATSIDLKAVSQIALLLTVLYAVGAL
LNYGQSFIISTVIQYFSKRLRTAIAEKINKLPLGYFDGHSQGDTLSRVTNDVDTVGQSLNQSLGNVISASLLLVAVVLTM
FFMNWILALVTILATILGFVFVGLIMGKSQGYFTAQQNDLAAVNGYVEEMYSGHNVVTSYNAIEQSKERFAVLNNNLYNS
IWKSQFISGMMMPLMFFTGNFAYVLVILVGAALAINGSISIGIIVAFMVYVRTFSQPLSQIAQGITVLQQAGAALVRVLD
FLAEPEMEDDQHKEQQLAAVKGDVAFEEVFFGYKPDQTIIHDFSAQAKAGQKIAIVGPTGAGKTTIVNLLMKFYEINKGR
ISIDGIDIKDMKRSEVHDAFSMVLQDTWLFEGTIRENLIYNQEHVTDEAVVAAAKAVGVHHFIMTLPQGYDTVLDDTVNL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGN
HDELMDQNGFYADLYNSQFVEEDAS

Nucleotide


Download         Length: 1758 bp        

>NTDB_id=27509 SSA_RS02405 WP_011836527.1 464955..466712(+) (rcrQ) [Streptococcus sanguinis SK36]
ATGGAAAATAAGAAGCCTTCATTATTTAGCCAGATACGGCCTTATCTCAAAGGCTTCCAGCTTCCTCTTGCTTTGGCATT
TGTGGGAGCTGTCTTGTCAAACATTATCACGGTCTATGGGCCAATTAAATTAAAAGAAATTACCAATCTCATTTCTGATG
GTCTGGCTACCAGCATTGATTTGAAAGCTGTGTCTCAGATTGCCCTTCTGCTGACCGTGCTCTATGCAGTCGGAGCCCTG
CTCAACTATGGTCAGTCCTTTATCATCAGTACGGTTATCCAGTATTTCTCTAAGCGACTGCGGACGGCCATTGCAGAGAA
GATTAATAAGCTGCCGCTGGGCTATTTCGATGGTCATTCTCAGGGGGATACTCTGTCGCGCGTGACCAATGACGTGGATA
CGGTCGGCCAATCCCTCAACCAGAGTCTGGGAAATGTTATCTCTGCTAGCCTGCTCTTGGTGGCTGTGGTCTTGACCATG
TTCTTTATGAACTGGATCTTGGCCTTGGTAACTATCTTGGCTACTATACTCGGTTTTGTCTTTGTCGGGCTCATCATGGG
CAAGTCTCAGGGTTATTTCACCGCCCAGCAAAACGATCTGGCGGCTGTCAACGGTTATGTAGAGGAGATGTACTCCGGTC
ATAATGTCGTTACCAGCTATAATGCTATTGAGCAGTCTAAGGAGCGCTTTGCAGTTCTCAATAACAATCTCTATAACAGT
ATTTGGAAGTCTCAATTTATCTCTGGCATGATGATGCCGCTCATGTTCTTTACGGGGAATTTCGCCTATGTGCTGGTTAT
TTTGGTAGGTGCTGCTCTGGCGATTAATGGCTCTATTAGCATCGGAATTATCGTCGCCTTTATGGTTTATGTGCGGACCT
TCTCTCAGCCATTGTCACAGATTGCCCAAGGTATCACTGTCTTGCAGCAGGCTGGTGCAGCACTGGTTCGTGTCCTTGAC
TTTCTGGCTGAGCCGGAGATGGAAGACGACCAGCATAAAGAGCAGCAGCTTGCTGCTGTCAAGGGAGATGTTGCCTTTGA
AGAAGTCTTCTTCGGTTACAAGCCAGACCAGACAATCATTCATGATTTCTCAGCCCAGGCCAAAGCCGGACAGAAGATTG
CCATTGTCGGCCCGACGGGTGCTGGTAAGACGACCATCGTTAATCTCCTTATGAAGTTCTATGAAATTAATAAAGGGCGT
ATCAGCATTGATGGTATAGATATTAAGGATATGAAACGCTCTGAGGTTCACGATGCCTTTTCAATGGTCTTGCAGGATAC
CTGGCTCTTTGAAGGAACTATCCGAGAGAACTTGATTTACAATCAGGAGCATGTCACGGATGAAGCAGTTGTTGCTGCAG
CGAAGGCGGTCGGTGTTCATCACTTTATCATGACTCTGCCGCAGGGCTATGATACAGTGCTGGATGACACGGTCAACTTA
TCGGTTGGTCAGAAGCAGCTGTTGACCATCGCTCGTGCTCTGTTGAAAGATGCGCCGCTCTTGATCTTGGATGAGGCAAC
TTCGTCAGTCGATACGCGGACGGAGGAGCTGATTCAAAAGGCTATGGACAAACTCATGGAGGGCCGGACTTCCTTTGTCA
TTGCCCACCGCCTGTCTACTATCCGTAATGCGGATCTTATCTTGGTCATGCGCGATGGAAATATCATCGAGCAGGGCAAC
CATGATGAACTCATGGATCAGAATGGCTTCTATGCGGACCTCTATAATAGTCAATTTGTAGAGGAAGATGCAAGTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(24-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3CL55

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

69.521

99.829

0.694

Multiple sequence alignment