Detailed information NTG0274875

Bioinformatically predicted

Overview

• Name: comQ
• Type: Regulator
• Locus tag: D2M30_RS15685
• Genome accession: NZ_CP032146
• Coordinates: 3078972..3079883 (-)
• Length: 303 a.a.
• NCBI ID: WP_125123647.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain YP6
• Function: modification of ComX; production of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 3073972..3084883

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D2M30_RS15650 (D2M30_15665)	-	3074217..3074693 (+)	477	WP_013353390.1	Na+/H+ antiporter subunit E	-
D2M30_RS15655 (D2M30_15670)	-	3074693..3074977 (+)	285	WP_045509491.1	Na(+)/H(+) antiporter subunit F1	-
D2M30_RS15660 (D2M30_15675)	mnhG	3074961..3075335 (+)	375	WP_045509488.1	monovalent cation/H(+) antiporter subunit G	-
D2M30_RS15665 (D2M30_15680)	-	3075375..3075758 (-)	384	WP_045509485.1	hotdog fold thioesterase	-
D2M30_RS15670 (D2M30_15685)	comA	3075780..3076424 (-)	645	WP_014472195.1	response regulator transcription factor	Regulator
D2M30_RS15675 (D2M30_15690)	comP	3076505..3078796 (-)	2292	WP_088613350.1	histidine kinase	Regulator
D2M30_RS15680 (D2M30_15695)	comX	3078808..3078972 (-)	165	WP_007613432.1	competence pheromone ComX	-
D2M30_RS15685 (D2M30_15700)	comQ	3078972..3079883 (-)	912	WP_125123647.1	polyprenyl synthetase family protein	Regulator
D2M30_RS15690 (D2M30_15705)	degQ	3080035..3080175 (-)	141	WP_013353398.1	degradation enzyme regulation protein DegQ	Regulator
D2M30_RS15700 (D2M30_15715)	-	3080640..3080981 (+)	342	WP_045509476.1	hypothetical protein	-
D2M30_RS15705 (D2M30_15720)	-	3080988..3082211 (-)	1224	WP_013353400.1	EAL and HDOD domain-containing protein	-
D2M30_RS15710 (D2M30_15725)	-	3082341..3083807 (-)	1467	WP_125123168.1	nicotinate phosphoribosyltransferase	-
D2M30_RS15715 (D2M30_15730)	-	3083825..3084376 (-)	552	WP_045509472.1	cysteine hydrolase family protein	-
D2M30_RS15720 (D2M30_15735)	-	3084456..3084851 (-)	396	WP_125123169.1	YueI family protein	-

Sequence

Protein

• Length: 303 a.a.
• Molecular weight: 34928.36 Da
• Isoelectric Point: 4.8894

>NTDB_id=274875 D2M30_RS15685 WP_125123647.1 3078972..3079883(-) (comQ) [Bacillus amyloliquefaciens strain YP6]
MCLDAETIKGKMKEIVEHNIYNTNLKMYLLKFIASKDSFGFAELAYQHYTAFNGRDTEAILKLAVGLELLVLSYDIYDDL
EDNDNLKMEWMKTGLPITLNTVTALYTLSIQVMNQVSENPYFLKQILNFALNSIEGQQDDILNAPQTEEECLEMIKNKSG
SLTAMPCVMGAMLATGNLNPIVQSYSYELGIISQIDNDYQGLFYLNNDFVQRKNTLAYLYLKKRFNKASEEILQWYENPE
LFKTLKTRDIKKKLIEAGVTQYLLVLKHMSLKKIKSKIFQLEIERNKSETLLNAIVNLEEDEK

Nucleotide

• Length: 912 bp

>NTDB_id=274875 D2M30_RS15685 WP_125123647.1 3078972..3079883(-) (comQ) [Bacillus amyloliquefaciens strain YP6]
ATGTGTTTAGATGCCGAAACGATTAAAGGGAAGATGAAGGAAATTGTAGAGCACAATATATACAATACTAACTTGAAAAT
GTACCTTCTGAAATTTATTGCATCAAAAGATTCATTTGGATTTGCTGAATTGGCATATCAACATTACACGGCGTTCAATG
GCAGAGACACAGAGGCAATTTTAAAGTTAGCCGTAGGTTTAGAATTATTAGTTCTGTCATACGACATTTATGATGATTTA
GAAGATAATGATAATCTGAAAATGGAATGGATGAAAACAGGTCTCCCCATTACGCTGAATACTGTAACGGCTCTCTATAC
ATTAAGTATACAGGTTATGAATCAGGTTAGTGAAAACCCGTATTTTCTTAAGCAAATTTTAAACTTTGCTTTGAATTCAA
TTGAGGGCCAGCAAGATGATATTTTGAATGCACCGCAAACTGAAGAAGAGTGCTTGGAAATGATTAAGAATAAATCTGGC
TCTTTAACTGCTATGCCTTGCGTTATGGGAGCGATGCTGGCTACAGGAAATTTAAATCCAATCGTTCAATCATATTCGTA
TGAACTCGGAATAATATCCCAGATTGATAATGATTATCAGGGTTTGTTTTACTTGAATAATGATTTTGTTCAACGCAAAA
ATACACTTGCTTATTTATATTTAAAAAAGAGATTCAATAAAGCTTCTGAAGAAATCTTACAGTGGTATGAAAACCCAGAG
CTATTCAAAACCTTAAAAACTCGAGACATAAAAAAGAAATTAATTGAAGCAGGTGTAACTCAATACTTATTGGTTTTGAA
ACATATGTCGTTAAAGAAAATAAAAAGTAAGATATTTCAATTGGAAATAGAAAGGAATAAATCAGAAACTTTATTAAATG
CGATTGTTAATTTAGAGGAGGATGAAAAATAA

Domains

Predicted by InterProScan.

• Polyprenyl synthetase (polyprenyl_synt) (50-237)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comQ	Bacillus subtilis subsp. subtilis str. 168	43.416	92.739	0.403