Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   C5I45_RS20020 Genome accession   NZ_CP027061
Coordinates   3553659..3553823 (-) Length   54 a.a.
NCBI ID   WP_269465305.1    Uniprot ID   -
Organism   Bacillus sp. ZY-1-1     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3548659..3558823
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5I45_RS20020 comS 3553659..3553823 (-) 165 WP_269465305.1 competence protein ComS Regulator
  C5I45_RS20025 srfAB 3553840..3556932 (-) 3093 Protein_3452 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6264.26 Da        Isoelectric Point: 11.7559

>NTDB_id=274853 C5I45_RS20020 WP_269465305.1 3553659..3553823(-) (comS) [Bacillus sp. ZY-1-1]
MRPRRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=274853 C5I45_RS20020 WP_269465305.1 3553659..3553823(-) (comS) [Bacillus sp. ZY-1-1]
ATGAGACCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5

Multiple sequence alignment