Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | D2M30_RS08305 | Genome accession | NZ_CP032146 |
| Coordinates | 1628938..1629300 (+) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens strain YP6 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1623938..1634300
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D2M30_RS08275 (D2M30_08290) | flgD | 1624853..1625284 (+) | 432 | WP_071346811.1 | flagellar hook assembly protein FlgD | - |
| D2M30_RS08280 (D2M30_08295) | flgG | 1625309..1626085 (+) | 777 | WP_013352263.1 | flagellar basal body rod protein FlgG | - |
| D2M30_RS08285 (D2M30_08300) | - | 1626125..1626340 (+) | 216 | WP_013352264.1 | flagellar FlbD family protein | - |
| D2M30_RS08290 (D2M30_08305) | fliL | 1626337..1626756 (+) | 420 | WP_013352265.1 | flagellar basal body-associated protein FliL | - |
| D2M30_RS08295 (D2M30_08310) | fliM | 1626790..1627788 (+) | 999 | WP_013352266.1 | flagellar motor switch protein FliM | - |
| D2M30_RS08300 (D2M30_08315) | fliY | 1627778..1628911 (+) | 1134 | WP_125122607.1 | flagellar motor switch phosphatase FliY | - |
| D2M30_RS08305 (D2M30_08320) | pilH | 1628938..1629300 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| D2M30_RS08310 (D2M30_08325) | fliZ | 1629315..1629968 (+) | 654 | WP_013352268.1 | flagella biosynthesis regulatory protein FliZ | - |
| D2M30_RS08315 (D2M30_08330) | fliP | 1629961..1630626 (+) | 666 | WP_013352269.1 | flagellar type III secretion system pore protein FliP | - |
| D2M30_RS08320 (D2M30_08335) | fliQ | 1630641..1630910 (+) | 270 | WP_013352270.1 | flagellar biosynthesis protein FliQ | - |
| D2M30_RS08325 (D2M30_08340) | fliR | 1630917..1631696 (+) | 780 | WP_045506167.1 | flagellar biosynthetic protein FliR | - |
| D2M30_RS08330 (D2M30_08345) | flhB | 1631696..1632775 (+) | 1080 | WP_088612805.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=274823 D2M30_RS08305 WP_003154238.1 1628938..1629300(+) (pilH) [Bacillus amyloliquefaciens strain YP6]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=274823 D2M30_RS08305 WP_003154238.1 1628938..1629300(+) (pilH) [Bacillus amyloliquefaciens strain YP6]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAATGGTTT
TGACGTTGTTGCTGAAGCTTCGGACGGAGCACAGGCAGTCGAAAAATTCAAAGAACATTCACCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACCGCATTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGGCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAGCCATTCCA
AGCAGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAATGGTTT
TGACGTTGTTGCTGAAGCTTCGGACGGAGCACAGGCAGTCGAAAAATTCAAAGAACATTCACCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACCGCATTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGGCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAGCCATTCCA
AGCAGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |