Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   D2M30_RS00590 Genome accession   NZ_CP032146
Coordinates   107992..109074 (+) Length   360 a.a.
NCBI ID   WP_014469611.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain YP6     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 102992..114074
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D2M30_RS00575 (D2M30_00580) - 102992..104083 (+) 1092 WP_013350790.1 protein arginine kinase -
  D2M30_RS00580 (D2M30_00585) clpC 104080..106515 (+) 2436 WP_013350791.1 ATP-dependent protease ATP-binding subunit ClpC Regulator
  D2M30_RS00585 (D2M30_00590) radA/sms 106609..107988 (+) 1380 WP_045514053.1 DNA repair protein RadA Machinery gene
  D2M30_RS00590 (D2M30_00595) disA 107992..109074 (+) 1083 WP_014469611.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  D2M30_RS00595 (D2M30_00600) - 109188..110288 (+) 1101 WP_013350794.1 PIN/TRAM domain-containing protein -
  D2M30_RS00600 (D2M30_00605) ispD 110302..111000 (+) 699 WP_071348600.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase -
  D2M30_RS00605 (D2M30_00610) ispF 110993..111469 (+) 477 WP_013350796.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  D2M30_RS00610 (D2M30_00615) gltX 111561..113012 (+) 1452 WP_125121953.1 glutamate--tRNA ligase -
  D2M30_RS00615 (D2M30_00620) cysE 113323..113976 (+) 654 WP_003156410.1 serine O-acetyltransferase -

Sequence


Protein


Download         Length: 360 a.a.        Molecular weight: 40643.16 Da        Isoelectric Point: 5.5321

>NTDB_id=274762 D2M30_RS00590 WP_014469611.1 107992..109074(+) (disA) [Bacillus amyloliquefaciens strain YP6]
MEKEKKGAKQELDLSAILQFVAPGTPLRAGIENVLRANTGGLIVVGYNDKVKQVVDGGFHINTSFAPAHLYELAKMDGAI
ILSDSGQKILYANTQLMPEATISSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQDSMKYTLKDIGFILTKANQAI
QTLEKYKTILDKTITALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTEGHLIRLQVIELITDMEEEAALF
IKDYVKEKIKDPFVLLKELQDMSSYDLLDDSILFKLLGYPASTNLDDYVLPRGYRLLNKIPRLPMPIVENVVEAFGFLPS
ITEATAEELDDVEGIGEVRAQKIKKGLKRLQEKHYIDRQL

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=274762 D2M30_RS00590 WP_014469611.1 107992..109074(+) (disA) [Bacillus amyloliquefaciens strain YP6]
ATGGAAAAAGAGAAAAAAGGGGCGAAACAAGAGCTTGACCTGTCTGCAATCCTGCAGTTCGTTGCACCGGGAACCCCGCT
CAGAGCCGGGATAGAAAATGTACTTCGGGCAAATACAGGCGGCCTGATTGTTGTCGGTTACAACGATAAGGTAAAACAAG
TCGTGGATGGCGGTTTTCATATTAATACATCATTTGCGCCCGCTCACTTATACGAGCTGGCCAAAATGGACGGGGCCATT
ATTTTAAGTGATTCCGGCCAGAAAATTCTTTATGCGAATACACAGCTTATGCCGGAGGCGACCATTTCTTCTTCAGAAAC
GGGAATGAGGCACCGTACGGCGGAACGGGTGGCGAAGCAGACCGGCTGTCTCGTTATAGCCATTTCTGAACGCAGAAATG
TCATTACGTTATACCAGGACAGCATGAAGTACACACTAAAGGACATAGGCTTTATTTTAACAAAGGCTAACCAGGCCATT
CAAACGCTTGAGAAGTATAAAACCATTCTAGACAAAACGATTACAGCTTTAAACGCCTTAGAATTTGAGGAGCTTGTGAC
ATTCAGTGACGTGCTGTCCGTCATGCACCGGTATGAAATGGTGCTCCGTATAAAAAATGAAATCAACATGTATATTAAAG
AACTCGGAACGGAAGGCCATTTAATCCGTCTGCAGGTGATTGAACTGATTACGGATATGGAAGAAGAAGCGGCTCTTTTC
ATCAAAGACTATGTAAAAGAAAAAATCAAAGATCCGTTCGTGCTGTTAAAAGAGCTTCAGGATATGTCCAGCTATGATCT
GCTTGATGATTCCATTTTGTTTAAGCTGCTTGGATATCCCGCTTCTACTAATCTCGATGATTATGTCCTGCCGAGAGGAT
ACAGGCTGCTGAACAAAATTCCGCGTCTGCCGATGCCGATTGTTGAAAATGTGGTTGAGGCATTCGGATTTTTGCCAAGC
ATAACGGAAGCGACAGCCGAAGAACTGGATGATGTTGAAGGTATCGGCGAGGTGCGCGCCCAAAAAATCAAAAAAGGCTT
AAAACGCCTCCAAGAAAAACACTATATAGATAGACAGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

94.722

100

0.947