Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   D2M30_RS00225 Genome accession   NZ_CP032146
Coordinates   42518..43345 (+) Length   275 a.a.
NCBI ID   WP_013350747.1    Uniprot ID   A0A9P1JDV1
Organism   Bacillus amyloliquefaciens strain YP6     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 37518..48345
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D2M30_RS00200 (D2M30_00200) - 38593..40026 (+) 1434 WP_065521831.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  D2M30_RS00205 (D2M30_00205) tmk 40023..40661 (+) 639 WP_013350744.1 dTMP kinase -
  D2M30_RS00210 (D2M30_00210) darA 40732..41061 (+) 330 WP_004264734.1 cyclic di-AMP receptor DarA -
  D2M30_RS00215 (D2M30_00215) - 41074..41514 (+) 441 WP_013350745.1 YaaR family protein -
  D2M30_RS00220 (D2M30_00220) holB 41526..42515 (+) 990 WP_013350746.1 DNA polymerase III subunit delta' -
  D2M30_RS00225 (D2M30_00225) yaaT 42518..43345 (+) 828 WP_013350747.1 competence/sporulation regulator complex protein RicT Regulator
  D2M30_RS00230 (D2M30_00230) yabA 43360..43719 (+) 360 WP_013350748.1 replication initiation-control protein YabA -
  D2M30_RS00235 (D2M30_00235) - 43780..44523 (+) 744 WP_125121935.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  D2M30_RS00240 (D2M30_00240) - 44510..44809 (+) 300 WP_013350750.1 GIY-YIG nuclease family protein -
  D2M30_RS00245 (D2M30_00245) rsmI 44784..45665 (+) 882 WP_125121936.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  D2M30_RS00250 (D2M30_00250) abrB 45715..46005 (-) 291 WP_169510469.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31174.96 Da        Isoelectric Point: 4.6504

>NTDB_id=274757 D2M30_RS00225 WP_013350747.1 42518..43345(+) (yaaT) [Bacillus amyloliquefaciens strain YP6]
MYNVIGVRFKKAGKIYYFDPNGFDIEQDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEICQKKVADHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDLGEMITTANGPAKVVGLNI
LERVLQVELKNREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=274757 D2M30_RS00225 WP_013350747.1 42518..43345(+) (yaaT) [Bacillus amyloliquefaciens strain YP6]
TTGTACAACGTAATAGGCGTCCGCTTTAAAAAAGCGGGAAAAATTTATTATTTTGATCCGAACGGATTTGATATAGAACA
GGACAGCTGCGTCATTGTTGAAACCGTAAGAGGTGTCGAATACGGACAGGTTGTCATCGCAAATAAACAAGTGGACGAGC
ATGATGTTGTGCTTCCGCTTCGAAAAGTCATTCGCGTTGCTGATGAACGCGATCTTCTCATTGTAGAAGAAAACAAACAA
GAGGCCCTGTCCGCTTTTGAAATCTGTCAGAAAAAAGTGGCTGATCACGGCTTAGATATGAAACTGGTTGATGTTGAGTT
TACGTTTGACCGCAATAAAGTCATTTTTTACTTCACAGCCGACGGACGGGTTGATTTCAGGGAATTGGTCAAAGACTTGG
CTTCTATCTTTAAAACAAGAATCGAATTGCGCCAAATCGGTGTGAGGGACGAAGCGAAAATGCTCGGCGGTATCGGCCCG
TGCGGGAGAATGCTTTGCTGCTCCACGTTCCTCGGTGATTTTGAACCGGTGTCCATCAAAATGGCGAAGGATCAAAATTT
ATCGTTGAACCCAACGAAAATTTCGGGTCTGTGCGGCCGTTTGATGTGCTGTTTGAAGTACGAAAATGATGAGTATGAGA
CGGCGAAAGAACAGCTGCCGGATTTAGGCGAAATGATTACAACGGCAAACGGCCCCGCAAAGGTTGTCGGTCTTAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGAAGAATCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9P1JDV1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

97.091

100

0.971

Multiple sequence alignment