Detailed information NTG0274643

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: C5Y82_RS06835
• Genome accession: NZ_CP027034
• Coordinates: 1369966..1370244 (+)
• Length: 92 a.a.
• NCBI ID: WP_012009813.1
• Uniprot ID: A8FCR0
• Organism: Bacillus pumilus strain 150a
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 1364966..1375244

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C5Y82_RS06815 (C5Y82_06815)	-	1365282..1366901 (+)	1620	WP_050945126.1	ATP-binding cassette domain-containing protein	-
C5Y82_RS06825 (C5Y82_06825)	-	1367138..1368370 (-)	1233	WP_012009811.1	aminopeptidase	-
C5Y82_RS19180	-	1368477..1368608 (-)	132	WP_003210922.1	protein YkpC	-
C5Y82_RS06830 (C5Y82_06830)	mreBH	1368683..1369690 (-)	1008	WP_012009812.1	rod-share determining protein MreBH	-
C5Y82_RS06835 (C5Y82_06835)	abrB	1369966..1370244 (+)	279	WP_012009813.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
C5Y82_RS06840 (C5Y82_06840)	-	1370387..1371697 (+)	1311	WP_119124793.1	ATP-binding protein	-
C5Y82_RS06845 (C5Y82_06845)	-	1371702..1372538 (+)	837	WP_012009815.1	gamma-glutamylcyclotransferase family protein	-
C5Y82_RS06850 (C5Y82_06850)	-	1372576..1373244 (+)	669	WP_119124794.1	TrkA family potassium uptake protein	-
C5Y82_RS06855 (C5Y82_06855)	ade	1373507..1375237 (+)	1731	WP_012009817.1	adenine deaminase	-

Sequence

Protein

• Length: 92 a.a.
• Molecular weight: 10291.94 Da
• Isoelectric Point: 4.5216

>NTDB_id=274643 C5Y82_RS06835 WP_012009813.1 1369966..1370244(+) (abrB) [Bacillus pumilus strain 150a]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSMEFFIDGDKIVLKKYQPEGVCLMTGEITSENHDYGNGQITLSAEGAE
LLLKELQEALQQ

Nucleotide

• Length: 279 bp

>NTDB_id=274643 C5Y82_RS06835 WP_012009813.1 1369966..1370244(+) (abrB) [Bacillus pumilus strain 150a]
TTGAAATCTATCGGAGTCGTAAGAAAAGTAGACGAACTAGGGCGTATTGTGATGCCAATCGAATTAAGAAGAGCACTTGA
TATTGCTATTAAAGACAGTATGGAATTTTTTATAGATGGGGATAAAATCGTCTTGAAAAAATACCAGCCAGAAGGTGTTT
GCCTCATGACTGGTGAGATTACATCAGAGAACCATGATTATGGTAATGGTCAAATTACATTAAGCGCTGAAGGCGCAGAA
CTACTGTTAAAAGAACTTCAAGAAGCTCTTCAGCAGTAA

Domains

Predicted by InterproScan.

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

• AbrB C-terminal domain (AbrB_C) (53-88)

3D structure

• AlphaFold DB: A8FCR0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	54.348	100	0.543