Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | C5Y82_RS05015 | Genome accession | NZ_CP027034 |
| Coordinates | 1024611..1025189 (+) | Length | 192 a.a. |
| NCBI ID | WP_012009479.1 | Uniprot ID | A8FBP5 |
| Organism | Bacillus pumilus strain 150a | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1019611..1030189
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5Y82_RS04995 (C5Y82_04995) | - | 1020104..1021399 (-) | 1296 | WP_012009476.1 | globin-coupled sensor protein | - |
| C5Y82_RS05000 (C5Y82_05000) | - | 1021491..1023023 (-) | 1533 | WP_119124654.1 | FAD-dependent oxidoreductase | - |
| C5Y82_RS05005 (C5Y82_05005) | - | 1023169..1024029 (+) | 861 | WP_012009478.1 | SDR family oxidoreductase | - |
| C5Y82_RS05010 (C5Y82_05010) | - | 1024092..1024322 (-) | 231 | WP_003210924.1 | IDEAL domain-containing protein | - |
| C5Y82_RS05015 (C5Y82_05015) | comK | 1024611..1025189 (+) | 579 | WP_012009479.1 | competence protein ComK | Regulator |
| C5Y82_RS05020 (C5Y82_05020) | - | 1025349..1026455 (+) | 1107 | WP_012009480.1 | D-TA family PLP-dependent enzyme | - |
| C5Y82_RS05025 (C5Y82_05025) | - | 1026768..1027250 (+) | 483 | WP_012009481.1 | hypothetical protein | - |
| C5Y82_RS05030 (C5Y82_05030) | - | 1027281..1028720 (-) | 1440 | WP_012009482.1 | PLP-dependent aminotransferase family protein | - |
| C5Y82_RS05035 (C5Y82_05035) | - | 1028865..1030034 (+) | 1170 | WP_119124655.1 | MFS transporter | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22332.40 Da Isoelectric Point: 8.7996
>NTDB_id=274629 C5Y82_RS05015 WP_012009479.1 1024611..1025189(+) (comK) [Bacillus pumilus strain 150a]
MSGISETPLDSYVINQATMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
MSGISETPLDSYVINQATMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
Nucleotide
Download Length: 579 bp
>NTDB_id=274629 C5Y82_RS05015 WP_012009479.1 1024611..1025189(+) (comK) [Bacillus pumilus strain 150a]
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAGCAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTATGTTGAATTAAAACCTCTGCAAATTATTGAACGCA
GCTGCCGATTCTTCGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGTATTTCTCACAAGCCTCCC
ATTGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACTTATTCATCCAATCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATCTTTACAAATGAGCAAACCGTCAAACTTG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACAAAATTTCAAGATCGTCTTGATGGT
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTACGGAACAGATATTAA
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAGCAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTATGTTGAATTAAAACCTCTGCAAATTATTGAACGCA
GCTGCCGATTCTTCGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGTATTTCTCACAAGCCTCCC
ATTGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACTTATTCATCCAATCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATCTTTACAAATGAGCAAACCGTCAAACTTG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACAAAATTTCAAGATCGTCTTGATGGT
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTACGGAACAGATATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
61.979 |
100 |
0.62 |