Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   C5Y82_RS04035 Genome accession   NZ_CP027034
Coordinates   848341..849132 (+) Length   263 a.a.
NCBI ID   WP_012009320.1    Uniprot ID   A8FB62
Organism   Bacillus pumilus strain 150a     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 843341..854132
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5Y82_RS04000 (C5Y82_04000) - 844105..844572 (+) 468 WP_119124598.1 DUF393 domain-containing protein -
  C5Y82_RS04005 (C5Y82_04005) - 844609..845865 (-) 1257 WP_012009315.1 transcriptional regulator -
  C5Y82_RS04015 (C5Y82_04015) - 846138..846725 (+) 588 WP_205529937.1 nitroreductase -
  C5Y82_RS04020 (C5Y82_04020) - 846971..847126 (-) 156 WP_012009317.1 YfhD family protein -
  C5Y82_RS04025 (C5Y82_04025) - 847188..847298 (-) 111 WP_017358836.1 YfhE family protein -
  C5Y82_RS04030 (C5Y82_04030) - 847351..848246 (-) 896 Protein_748 TIGR01777 family oxidoreductase -
  C5Y82_RS04035 (C5Y82_04035) recX 848341..849132 (+) 792 WP_012009320.1 recombination regulator RecX Regulator
  C5Y82_RS04040 (C5Y82_04040) - 849136..849450 (+) 315 WP_012009321.1 YfhH family protein -
  C5Y82_RS04045 (C5Y82_04045) - 849473..849646 (-) 174 WP_012009322.1 YpzG family protein -
  C5Y82_RS04050 (C5Y82_04050) - 849672..849821 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  C5Y82_RS04055 (C5Y82_04055) - 849938..850210 (+) 273 WP_012009323.1 YfhJ family protein -
  C5Y82_RS04060 (C5Y82_04060) - 850501..851484 (+) 984 WP_003217835.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30746.17 Da        Isoelectric Point: 6.7755

>NTDB_id=274625 C5Y82_RS04035 WP_012009320.1 848341..849132(+) (recX) [Bacillus pumilus strain 150a]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIDIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIEDDHIEQALSQYPDDLQLEE
AVKQVQKLVRKEKNRSTKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMMEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=274625 C5Y82_RS04035 WP_012009320.1 848341..849132(+) (recX) [Bacillus pumilus strain 150a]
ATGCCCTATATTACAAAAATCTCTGCTCAAAAAAACAATACAGAGCGGGTGAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTGGATCTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGAAAAGAACTGGACGAAGCCGATATCATTGACATTC
AATTCGGTGATGCTGTCAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCCTACCGAATGAGATCAGTGAAAGAAGTC
ACCGATTATTTGACGAAAAAAGAAATCCCGGCACCTGCCATTAGTGAAATTATACACAAATTAAAGCATTACAAGTATGT
AAATGATCTCGAATTTGCAGAAGCTTATGTCAGTACTCACCGTAAAACGAACAGCAAAGGGCCATCCGTTCTGAAAAAAG
AGCTAAAGCTCAAAGGAATAGAGGATGACCACATTGAACAAGCACTATCGCAATATCCTGATGACTTACAGCTGGAGGAA
GCTGTGAAGCAGGTTCAGAAGCTTGTGAGAAAAGAAAAAAATCGTTCCACAAAAGAAATCGAGCAGCGCATCAAACTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCGCTCCTTTATATGATGGAGAAGGCAAAACGCAAGGTAGGATACGACGGATCATTTGAAAAGAAGATGAAG
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGACACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8FB62

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

62.738

100

0.627

Multiple sequence alignment