Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   RGna_RS15465 Genome accession   NZ_CP027002
Coordinates   3131589..3133412 (+) Length   607 a.a.
NCBI ID   WP_004842996.1    Uniprot ID   A0A829NMY4
Organism   Mediterraneibacter gnavus ATCC 29149     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3126589..3138412
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RGna_RS15445 (RGna_15525) rd 3127029..3127190 (-) 162 WP_004842991.1 rubredoxin -
  RGna_RS15450 (RGna_15530) - 3127493..3128647 (+) 1155 WP_039959704.1 DUF4317 domain-containing protein -
  RGna_RS15455 (RGna_15535) - 3128855..3129343 (+) 489 WP_004842994.1 MarR family winged helix-turn-helix transcriptional regulator -
  RGna_RS15460 (RGna_15540) - 3129362..3131596 (+) 2235 WP_004842995.1 ABC transporter ATP-binding protein -
  RGna_RS15465 (RGna_15545) rcrQ 3131589..3133412 (+) 1824 WP_004842996.1 ABC transporter ATP-binding protein Regulator
  RGna_RS15470 (RGna_15550) moaC 3133512..3134015 (+) 504 WP_004842998.1 cyclic pyranopterin monophosphate synthase MoaC -
  RGna_RS15475 (RGna_15555) - 3134012..3134512 (+) 501 WP_004842999.1 molybdenum cofactor biosynthesis protein B -
  RGna_RS15480 (RGna_15560) moaA 3134485..3135465 (+) 981 WP_039959705.1 GTP 3',8-cyclase MoaA -
  RGna_RS15485 (RGna_15565) - 3135472..3135915 (+) 444 WP_004843001.1 MOSC domain-containing protein -
  RGna_RS15490 (RGna_15570) prmA 3136007..3136963 (+) 957 WP_004843002.1 50S ribosomal protein L11 methyltransferase -
  RGna_RS15495 (RGna_15575) - 3136980..3137720 (+) 741 WP_004843003.1 16S rRNA (uracil(1498)-N(3))-methyltransferase -

Sequence

Protein


Download         Length: 607 a.a.        Molecular weight: 67747.29 Da        Isoelectric Point: 5.2811

>NTDB_id=274434 RGna_RS15465 WP_004842996.1 3131589..3133412(+) (rcrQ) [Mediterraneibacter gnavus ATCC 29149]
MPRHGHMGPQGADEKAKDLKGTLKKLLHYMSVFKVQMLLIVIFAVCGTTFTIIGPKILGKATTEIANGLMSKVSGGSGMD
FEKIGQILLLTLALYLVSTLCSFIQGYLMTGVSQKTTYRLRKEISEKINRMPMNYFDTKPVGEVLSRVTNDVDTLGQSLN
QSATQMIQSVTTLIGVLIMMLTISPLMTLVTLIILPISMLLIGFVMKHSQKYFRGQQEYLGNVNGQVEEVYSGHSIIKAF
NKEENVIDEFDATNDKLYDSAWKSQFFSGMMMPIMQFIGNLGYVVVAILGGFLTIKKTIEVGDIQSFIQYVRSFTQPIQQ
IAQVANMLQMTAAASERVFEFLEEEEEDQTVEHPVSVENLEGNVSFDHVHFGYNADRIIVNDFSAEVKEGQKIAIVGPTG
AGKTTMIKLLMRFYDVNSGAIKIDGHDVRDFNRSELREMFGMVLQDTWLFNGSIWDNIKYGKLDATDEEVIQAAKAAHVH
QFVKTLPGGYDMELNEEANNVSQGQKQLLTIARAILADPKILILDEATSFVDTRTEVLIQKAMDNLMKGRTSFVIAHRLS
TIRDADMILVMKDGDIVEQGNHEELLAKGGFYADLYNSQFEKTTEVA

Nucleotide


Download         Length: 1824 bp        

>NTDB_id=274434 RGna_RS15465 WP_004842996.1 3131589..3133412(+) (rcrQ) [Mediterraneibacter gnavus ATCC 29149]
ATGCCTAGACATGGACATATGGGTCCGCAAGGAGCGGATGAAAAAGCAAAGGATTTAAAGGGAACACTTAAGAAATTGCT
TCATTATATGAGTGTATTCAAGGTGCAGATGCTGTTGATCGTGATCTTTGCAGTCTGCGGAACAACATTTACGATTATCG
GACCAAAGATTCTTGGAAAAGCAACAACGGAAATTGCCAACGGTCTGATGAGCAAAGTATCCGGCGGAAGCGGGATGGAC
TTTGAAAAGATTGGACAGATCCTGCTGCTGACACTTGCATTATATCTGGTCAGCACATTGTGCTCGTTTATTCAGGGATA
TCTGATGACGGGGGTTTCTCAGAAAACAACATACCGTTTGCGAAAAGAAATCTCAGAGAAGATCAATCGTATGCCGATGA
ACTATTTTGATACAAAACCAGTCGGAGAAGTGTTATCCAGAGTGACCAATGATGTTGATACACTGGGACAGAGTCTGAAC
CAGAGTGCGACACAGATGATTCAATCCGTGACAACGCTGATTGGGGTGCTGATCATGATGCTTACGATCAGTCCTTTGAT
GACACTTGTGACACTGATTATTCTCCCGATTTCCATGCTGCTGATCGGATTTGTCATGAAGCATTCTCAGAAATATTTCC
GCGGACAGCAGGAGTATCTGGGAAATGTGAATGGACAGGTGGAAGAAGTTTACAGTGGTCACAGTATTATCAAGGCTTTT
AATAAAGAAGAAAATGTAATTGATGAGTTTGATGCAACCAATGACAAATTGTATGACTCTGCATGGAAATCGCAGTTCTT
TTCAGGAATGATGATGCCGATCATGCAGTTTATCGGAAATCTTGGCTATGTAGTCGTTGCGATTCTGGGAGGATTTCTGA
CGATCAAGAAAACGATTGAAGTGGGAGATATTCAGTCTTTCATTCAATATGTCAGAAGTTTTACACAGCCGATCCAGCAG
ATCGCACAGGTTGCAAATATGCTGCAGATGACAGCTGCGGCGTCCGAGAGAGTGTTTGAATTTCTGGAGGAAGAAGAGGA
AGATCAGACTGTGGAGCATCCGGTATCGGTAGAAAATCTGGAAGGAAATGTAAGCTTTGATCATGTTCATTTTGGATACA
ATGCGGATAGGATCATTGTCAATGACTTCTCAGCAGAAGTAAAAGAGGGGCAGAAAATTGCAATTGTAGGACCGACCGGA
GCAGGAAAGACAACGATGATCAAGCTTCTGATGCGATTCTACGATGTAAACAGCGGTGCGATCAAGATTGACGGACATGA
CGTCAGAGATTTCAACAGAAGTGAACTGCGTGAAATGTTCGGAATGGTGCTGCAGGATACCTGGCTGTTCAATGGAAGTA
TTTGGGACAACATCAAATACGGAAAACTGGATGCAACGGATGAAGAAGTGATCCAGGCAGCCAAGGCAGCTCATGTGCAT
CAGTTTGTGAAGACACTGCCGGGCGGATATGATATGGAACTGAATGAAGAAGCAAACAATGTGTCTCAGGGTCAGAAACA
GCTGTTGACGATCGCGAGGGCAATTCTGGCAGATCCGAAGATCCTGATTCTGGATGAGGCGACAAGTTTTGTAGATACAA
GGACAGAGGTATTGATCCAGAAAGCCATGGATAACCTGATGAAGGGACGTACCAGCTTTGTGATTGCTCATCGTCTGTCA
ACGATTCGGGATGCAGATATGATCCTTGTTATGAAAGACGGAGATATCGTAGAGCAGGGAAATCACGAAGAACTTCTGGC
AAAAGGCGGATTCTATGCGGATCTGTATAACTCACAGTTTGAGAAAACAACGGAAGTGGCATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(37-317)

ABC transporter (ABC_tran)

(381-529)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A829NMY4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

51.864

97.199

0.504

Multiple sequence alignment