Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | A320_RS15615 | Genome accession | NZ_CP032055 |
| Coordinates | 3290591..3291106 (+) | Length | 171 a.a. |
| NCBI ID | WP_000477147.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain A320 (RUH134) | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3285591..3296106
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A320_RS15600 (A320_03066) | - | 3285910..3287370 (+) | 1461 | WP_000004971.1 | amino acid permease | - |
| A320_RS15605 (A320_03067) | - | 3287647..3288852 (+) | 1206 | WP_000512707.1 | RtcB family protein | - |
| A320_RS18700 (A320_03068) | - | 3288871..3289014 (+) | 144 | WP_162138624.1 | hypothetical protein | - |
| A320_RS15610 (A320_03069) | omp38 | 3289139..3290209 (-) | 1071 | WP_000777882.1 | outer membrane protein Omp38 | - |
| A320_RS15615 (A320_03070) | fimT | 3290591..3291106 (+) | 516 | WP_000477147.1 | GspH/FimT family pseudopilin | Machinery gene |
| A320_RS15620 (A320_03071) | - | 3291215..3292390 (+) | 1176 | WP_000129968.1 | thiolase family protein | - |
| A320_RS15625 (A320_03072) | - | 3292517..3292960 (+) | 444 | WP_001176580.1 | VOC family protein | - |
| A320_RS15630 (A320_03073) | - | 3293003..3293356 (-) | 354 | WP_000457787.1 | multidrug efflux SMR transporter | - |
| A320_RS15635 (A320_03074) | - | 3293439..3293924 (-) | 486 | WP_000935249.1 | DUF934 domain-containing protein | - |
| A320_RS15640 (A320_03075) | - | 3293917..3295560 (-) | 1644 | WP_000281766.1 | nitrite/sulfite reductase | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19587.81 Da Isoelectric Point: 8.4960
>NTDB_id=274023 A320_RS15615 WP_000477147.1 3290591..3291106(+) (fimT) [Acinetobacter baumannii strain A320 (RUH134)]
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNHNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNHNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
Nucleotide
Download Length: 516 bp
>NTDB_id=274023 A320_RS15615 WP_000477147.1 3290591..3291106(+) (fimT) [Acinetobacter baumannii strain A320 (RUH134)]
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGTATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCATAATCTACAGCATGATTTAAATGAAGAGTTATTAACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAACTTAAAAATTGTTAG
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGTATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCATAATCTACAGCATGATTTAAATGAAGAGTTATTAACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAACTTAAAAATTGTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Acinetobacter baylyi ADP1 |
43.373 |
97.076 |
0.421 |