Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | RK64_RS08275 | Genome accession | NZ_CP026962 |
| Coordinates | 1661769..1662068 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain FDAARGOS_6 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1656769..1667068
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK64_RS08250 (RK64_08250) | gcvPA | 1657981..1659327 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| RK64_RS08255 (RK64_08255) | gcvT | 1659347..1660438 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| RK64_RS08260 (RK64_08260) | - | 1660597..1661121 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| RK64_RS08265 (RK64_08265) | - | 1661111..1661257 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| RK64_RS08270 (RK64_08270) | comGF | 1661354..1661851 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RK64_RS08275 (RK64_08275) | comGE | 1661769..1662068 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| RK64_RS08280 (RK64_08280) | comGD | 1662055..1662501 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RK64_RS08285 (RK64_08285) | comGC | 1662479..1662790 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RK64_RS08290 (RK64_08290) | comGB | 1662804..1663874 (-) | 1071 | Protein_1560 | competence type IV pilus assembly protein ComGB | - |
| RK64_RS08295 (RK64_08295) | comGA | 1663846..1664820 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RK64_RS08300 (RK64_08300) | - | 1664872..1665495 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| RK64_RS08305 (RK64_08305) | - | 1665492..1665821 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| RK64_RS08310 (RK64_08310) | - | 1665821..1666807 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| RK64_RS08315 (RK64_08315) | - | 1666804..1667007 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=273970 RK64_RS08275 WP_000844413.1 1661769..1662068(-) (comGE) [Staphylococcus aureus strain FDAARGOS_6]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=273970 RK64_RS08275 WP_000844413.1 1661769..1662068(-) (comGE) [Staphylococcus aureus strain FDAARGOS_6]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |