Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   RK73_RS07655 Genome accession   NZ_CP026960
Coordinates   1436822..1437538 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain FDAARGOS_15     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1431822..1442538
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RK73_RS07625 (RK73_07625) - 1432041..1432667 (+) 627 WP_000522384.1 nitroreductase family protein -
  RK73_RS07630 (RK73_07630) - 1433028..1433813 (+) 786 WP_000867960.1 carbon-nitrogen family hydrolase -
  RK73_RS14960 hld 1434410..1434490 (-) 81 WP_000046022.1 delta-hemolysin -
  RK73_RS07640 (RK73_07640) agrB 1434780..1435349 (+) 570 WP_001105707.1 accessory gene regulator AgrB -
  RK73_RS07645 (RK73_07645) agrD 1435346..1435486 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  RK73_RS07650 (RK73_07650) agrC 1435511..1436803 (+) 1293 Protein_1425 quorum-sensing sensor histidine kinase AgrC -
  RK73_RS07655 (RK73_07655) agrA 1436822..1437538 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  RK73_RS07660 (RK73_07660) - 1437610..1437717 (+) 108 WP_001790167.1 hypothetical protein -
  RK73_RS07665 (RK73_07665) - 1437905..1438864 (-) 960 WP_001253312.1 carbohydrate kinase family protein -
  RK73_RS07670 (RK73_07670) - 1438861..1440345 (-) 1485 WP_000141414.1 sucrose-6-phosphate hydrolase -
  RK73_RS07675 (RK73_07675) - 1440494..1441444 (-) 951 WP_000790330.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=273897 RK73_RS07655 WP_000688492.1 1436822..1437538(+) (agrA) [Staphylococcus aureus strain FDAARGOS_15]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=273897 RK73_RS07655 WP_000688492.1 1436822..1437538(+) (agrA) [Staphylococcus aureus strain FDAARGOS_15]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment