Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | RK73_RS04820 | Genome accession | NZ_CP026960 |
| Coordinates | 942367..942666 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain FDAARGOS_15 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 937367..947666
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK73_RS04795 (RK73_04795) | gcvPA | 938579..939925 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| RK73_RS04800 (RK73_04800) | gcvT | 939945..941036 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| RK73_RS04805 (RK73_04805) | - | 941195..941719 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| RK73_RS04810 (RK73_04810) | - | 941709..941855 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| RK73_RS04815 (RK73_04815) | comGF | 941952..942449 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RK73_RS04820 (RK73_04820) | comGE | 942367..942666 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| RK73_RS04825 (RK73_04825) | comGD | 942653..943099 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RK73_RS04830 (RK73_04830) | comGC | 943077..943388 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RK73_RS04835 (RK73_04835) | comGB | 943402..944472 (-) | 1071 | Protein_929 | competence type IV pilus assembly protein ComGB | - |
| RK73_RS04840 (RK73_04840) | comGA | 944444..945418 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RK73_RS04845 (RK73_04845) | - | 945470..946093 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| RK73_RS04850 (RK73_04850) | - | 946090..946419 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| RK73_RS04855 (RK73_04855) | - | 946419..947405 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| RK73_RS04860 (RK73_04860) | - | 947402..947605 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=273880 RK73_RS04820 WP_000844413.1 942367..942666(-) (comGE) [Staphylococcus aureus strain FDAARGOS_15]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=273880 RK73_RS04820 WP_000844413.1 942367..942666(-) (comGE) [Staphylococcus aureus strain FDAARGOS_15]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |