Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | D1369_RS17785 | Genome accession | NZ_CP031969 |
| Coordinates | 3910973..3913498 (-) | Length | 841 a.a. |
| NCBI ID | WP_007383773.1 | Uniprot ID | B5HYG6 |
| Organism | Streptomyces sp. CC0208 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3905973..3918498
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D1369_RS17760 | - | 3906098..3906592 (-) | 495 | WP_037900998.1 | helix-turn-helix transcriptional regulator | - |
| D1369_RS17765 | - | 3906737..3908302 (-) | 1566 | WP_037900996.1 | MDR family MFS transporter | - |
| D1369_RS17770 | - | 3908445..3909041 (+) | 597 | WP_037900994.1 | TetR/AcrR family transcriptional regulator | - |
| D1369_RS17775 | - | 3909108..3909656 (-) | 549 | WP_037900993.1 | M23 family metallopeptidase | - |
| D1369_RS17780 | - | 3910036..3910677 (+) | 642 | WP_037900991.1 | HAD family acid phosphatase | - |
| D1369_RS17785 | clpC | 3910973..3913498 (-) | 2526 | WP_007383773.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| D1369_RS17795 | - | 3913930..3914724 (+) | 795 | WP_037900989.1 | SCO3374 family protein | - |
| D1369_RS17800 | - | 3914772..3915107 (-) | 336 | WP_007383771.1 | Lsr2 family protein | - |
| D1369_RS17805 | - | 3915330..3915878 (-) | 549 | WP_007383770.1 | amino-acid N-acetyltransferase | - |
| D1369_RS17810 | - | 3915888..3916280 (-) | 393 | WP_007383769.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| D1369_RS17815 | - | 3916427..3916591 (-) | 165 | WP_007383768.1 | hypothetical protein | - |
| D1369_RS17820 | - | 3916650..3917342 (-) | 693 | WP_007383767.1 | hypothetical protein | - |
| D1369_RS17825 | - | 3917476..3918273 (-) | 798 | WP_007383766.1 | type III pantothenate kinase | - |
Sequence
Protein
Download Length: 841 a.a. Molecular weight: 92988.17 Da Isoelectric Point: 5.8409
>NTDB_id=273835 D1369_RS17785 WP_007383773.1 3910973..3913498(-) (clpC) [Streptomyces sp. CC0208]
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKETATAGGPAEGT
PSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKD
KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT
LDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLID
EAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGELI
AEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK
ALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILED
GRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAASGDKKTNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLT
QEDILAIVDLMIAKVDERLRDRDMGIELSQSAKELLSTKGYDQVLGARPLRRTIQREIEDTLSEKILFGELRPGHIVVVD
TEGEGETKTFTFRGEEKAALPDVPPIEQAAGGAGPNLSKDA
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKETATAGGPAEGT
PSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKD
KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT
LDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLID
EAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGELI
AEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK
ALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILED
GRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAASGDKKTNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLT
QEDILAIVDLMIAKVDERLRDRDMGIELSQSAKELLSTKGYDQVLGARPLRRTIQREIEDTLSEKILFGELRPGHIVVVD
TEGEGETKTFTFRGEEKAALPDVPPIEQAAGGAGPNLSKDA
Nucleotide
Download Length: 2526 bp
>NTDB_id=273835 D1369_RS17785 WP_007383773.1 3910973..3913498(-) (clpC) [Streptomyces sp. CC0208]
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAGCACATCCTCCTGGGCCTGATCCACGAGGGTGAGGGTGTCGCCGCCAAGGCCCTTGAGAGCCTCGGGA
TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGGCAGGGGCAGCAGGCCCCGTCCGGGCACATCCCCTTC
ACCCCCCGTGCCAAGAAGGTCCTGGAGCTGTCGCTCCGCGAGGCCCTTCAGCTGGGCCACAACTACATCGGCACGGAGCA
CATCCTGCTCGGCCTGATCCGTGAGGGCGAGGGCGTCGCCGCCCAGGTCCTGGTCAAGCTGGGCGCAGATCTCAACCGGG
TGCGGCAGCAGGTCATCCAGCTGCTCTCCGGTTACCAGGGCAAGGAGACCGCCACCGCCGGCGGGCCTGCCGAGGGCACC
CCCTCGACGTCCCTGGTCCTCGACCAGTTCGGCCGGAACCTCACCCAGGCCGCTCGTGAGTCCAAGCTCGACCCGGTCAT
CGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGTACCAAGAACAACCCGGTGCTGATCGGTGAGC
CCGGCGTCGGCAAGACCGCCGTCGTCGAGGGCCTCGCCCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAGGAC
AAGCACCTCTACACCCTGGACCTCGGCGCGCTGGTCGCCGGCTCCCGCTACCGCGGTGACTTCGAGGAGCGCCTGAAGAA
GGTTCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACGCTGGTCGGTGCGGGTGCCG
CCGAGGGCGCCATCGACGCCGCTTCGATCCTGAAGCCGATGCTGGCCCGTGGTGAGCTGCAGACCATCGGTGCGACCACG
CTGGACGAGTACCGCAAGCACCTGGAGAAGGACGCGGCCCTGGAGCGCCGCTTCCAGCCCATCCAGGTCGCGGAGCCGTC
CCTGCCGCACACGATCGAGATCCTCAAGGGTCTGCGCGACCGGTACGAGGCCCACCACCGTGTCTCGATCACGGACGAGG
CCCTCGTCCAGGCCGCCACCCTGGCCGACCGGTACATCTCGGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATCGAC
GAGGCCGGTTCGCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGAGAAGATCGCCGGTGT
CCGCCGGGACAAGGAGTCCGCGATCGACTCGCAGGACTTCGAGAAGGCCGCCTCCCTCCGCGACAAGGAGAAGCAGCTCC
TGGCCGCCAAGGCCAAGCGGGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTCGACGGCGAGCTGATC
GCCGAGGTCCTCGCGACCGCCACCGGCATCCCGGTCTTCAAGCTGACCGAGGAGGAGTCCTCGCGTCTGCTGCGCATGGA
GGACGAGCTCCACAAGCGGGTCATCGGCCAGGTCGACGCCGTCAAGGCGCTGTCGAAGGCGATCCGTCGTACGCGTGCCG
GTCTGAAGGACCCGAAGCGTCCCGGTGGTTCGTTCATCTTCGCCGGCCCGTCCGGTGTCGGTAAGACCGAGCTGTCCAAG
GCGCTCGCGGAGTTCCTCTTCGGTGACGAGGACGCGCTGATCTCCCTCGACATGTCGGAGTTCAGCGAGAAGCACACGGT
CTCGCGGCTCTTCGGTTCGCCTCCCGGTTACGTGGGCTACGAAGAGGGCGGCCAGCTGACCGAGAAGGTCCGCCGCAAGC
CGTTCTCCGTCGTCCTGTTCGACGAGGTCGAGAAGGCCCACCCGGACATCTTCAACTCGCTGCTGCAGATCCTGGAGGAC
GGTCGTCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTCATCATCATGACGACCAACCTCGGCACCCG
GGACATCTCCAAGGGCTTCAACCTGGGCTTCGCGGCCTCGGGCGACAAGAAGACCAATTACGAGCGCATGAAGAACAAGG
TCTCGGACGAGCTCAAGCAGCACTTCCGGCCCGAGTTCCTCAACCGCGTCGACGACGTGGTCGTCTTCCCGCAGCTGACG
CAGGAGGACATCCTCGCGATCGTCGACCTGATGATCGCCAAGGTGGACGAGCGCCTCAGGGACCGGGACATGGGCATCGA
GCTCTCCCAGTCCGCCAAGGAGCTGCTGTCGACCAAGGGTTACGACCAGGTGCTGGGCGCGCGTCCGCTGCGGCGCACGA
TCCAGCGCGAGATCGAGGACACGCTCTCGGAGAAGATCCTCTTCGGTGAGCTGCGTCCCGGTCACATCGTGGTCGTCGAC
ACGGAGGGCGAGGGCGAGACCAAGACCTTCACCTTCCGCGGCGAGGAGAAGGCGGCCCTGCCGGACGTCCCGCCGATCGA
GCAGGCGGCCGGCGGTGCCGGACCGAACCTGAGCAAGGACGCGTAA
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAGCACATCCTCCTGGGCCTGATCCACGAGGGTGAGGGTGTCGCCGCCAAGGCCCTTGAGAGCCTCGGGA
TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGGCAGGGGCAGCAGGCCCCGTCCGGGCACATCCCCTTC
ACCCCCCGTGCCAAGAAGGTCCTGGAGCTGTCGCTCCGCGAGGCCCTTCAGCTGGGCCACAACTACATCGGCACGGAGCA
CATCCTGCTCGGCCTGATCCGTGAGGGCGAGGGCGTCGCCGCCCAGGTCCTGGTCAAGCTGGGCGCAGATCTCAACCGGG
TGCGGCAGCAGGTCATCCAGCTGCTCTCCGGTTACCAGGGCAAGGAGACCGCCACCGCCGGCGGGCCTGCCGAGGGCACC
CCCTCGACGTCCCTGGTCCTCGACCAGTTCGGCCGGAACCTCACCCAGGCCGCTCGTGAGTCCAAGCTCGACCCGGTCAT
CGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGTACCAAGAACAACCCGGTGCTGATCGGTGAGC
CCGGCGTCGGCAAGACCGCCGTCGTCGAGGGCCTCGCCCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAGGAC
AAGCACCTCTACACCCTGGACCTCGGCGCGCTGGTCGCCGGCTCCCGCTACCGCGGTGACTTCGAGGAGCGCCTGAAGAA
GGTTCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACGCTGGTCGGTGCGGGTGCCG
CCGAGGGCGCCATCGACGCCGCTTCGATCCTGAAGCCGATGCTGGCCCGTGGTGAGCTGCAGACCATCGGTGCGACCACG
CTGGACGAGTACCGCAAGCACCTGGAGAAGGACGCGGCCCTGGAGCGCCGCTTCCAGCCCATCCAGGTCGCGGAGCCGTC
CCTGCCGCACACGATCGAGATCCTCAAGGGTCTGCGCGACCGGTACGAGGCCCACCACCGTGTCTCGATCACGGACGAGG
CCCTCGTCCAGGCCGCCACCCTGGCCGACCGGTACATCTCGGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATCGAC
GAGGCCGGTTCGCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGAGAAGATCGCCGGTGT
CCGCCGGGACAAGGAGTCCGCGATCGACTCGCAGGACTTCGAGAAGGCCGCCTCCCTCCGCGACAAGGAGAAGCAGCTCC
TGGCCGCCAAGGCCAAGCGGGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTCGACGGCGAGCTGATC
GCCGAGGTCCTCGCGACCGCCACCGGCATCCCGGTCTTCAAGCTGACCGAGGAGGAGTCCTCGCGTCTGCTGCGCATGGA
GGACGAGCTCCACAAGCGGGTCATCGGCCAGGTCGACGCCGTCAAGGCGCTGTCGAAGGCGATCCGTCGTACGCGTGCCG
GTCTGAAGGACCCGAAGCGTCCCGGTGGTTCGTTCATCTTCGCCGGCCCGTCCGGTGTCGGTAAGACCGAGCTGTCCAAG
GCGCTCGCGGAGTTCCTCTTCGGTGACGAGGACGCGCTGATCTCCCTCGACATGTCGGAGTTCAGCGAGAAGCACACGGT
CTCGCGGCTCTTCGGTTCGCCTCCCGGTTACGTGGGCTACGAAGAGGGCGGCCAGCTGACCGAGAAGGTCCGCCGCAAGC
CGTTCTCCGTCGTCCTGTTCGACGAGGTCGAGAAGGCCCACCCGGACATCTTCAACTCGCTGCTGCAGATCCTGGAGGAC
GGTCGTCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTCATCATCATGACGACCAACCTCGGCACCCG
GGACATCTCCAAGGGCTTCAACCTGGGCTTCGCGGCCTCGGGCGACAAGAAGACCAATTACGAGCGCATGAAGAACAAGG
TCTCGGACGAGCTCAAGCAGCACTTCCGGCCCGAGTTCCTCAACCGCGTCGACGACGTGGTCGTCTTCCCGCAGCTGACG
CAGGAGGACATCCTCGCGATCGTCGACCTGATGATCGCCAAGGTGGACGAGCGCCTCAGGGACCGGGACATGGGCATCGA
GCTCTCCCAGTCCGCCAAGGAGCTGCTGTCGACCAAGGGTTACGACCAGGTGCTGGGCGCGCGTCCGCTGCGGCGCACGA
TCCAGCGCGAGATCGAGGACACGCTCTCGGAGAAGATCCTCTTCGGTGAGCTGCGTCCCGGTCACATCGTGGTCGTCGAC
ACGGAGGGCGAGGGCGAGACCAAGACCTTCACCTTCCGCGGCGAGGAGAAGGCGGCCCTGCCGGACGTCCCGCCGATCGA
GCAGGCGGCCGGCGGTGCCGGACCGAACCTGAGCAAGGACGCGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
61.235 |
96.314 |
0.59 |
| clpC | Streptococcus mutans UA159 |
44.458 |
98.692 |
0.439 |
| clpC | Streptococcus thermophilus LMD-9 |
42.772 |
99.524 |
0.426 |
| clpC | Streptococcus thermophilus LMG 18311 |
42.601 |
99.643 |
0.424 |
| clpC | Streptococcus pneumoniae Rx1 |
44.085 |
95.482 |
0.421 |
| clpC | Streptococcus pneumoniae D39 |
44.085 |
95.482 |
0.421 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
43.58 |
96.314 |
0.42 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.11 |
94.887 |
0.419 |
| clpE | Streptococcus mutans UA159 |
54.153 |
74.435 |
0.403 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.358 |
75.624 |
0.396 |
| clpE | Streptococcus pneumoniae Rx1 |
52.201 |
75.624 |
0.395 |
| clpE | Streptococcus pneumoniae R6 |
52.201 |
75.624 |
0.395 |
| clpE | Streptococcus pneumoniae D39 |
52.201 |
75.624 |
0.395 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.742 |
73.722 |
0.389 |