Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   D1369_RS17715 Genome accession   NZ_CP031969
Coordinates   3897719..3898843 (+) Length   374 a.a.
NCBI ID   WP_007383787.1    Uniprot ID   B5HYI1
Organism   Streptomyces sp. CC0208     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3892719..3903843
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D1369_RS17700 - 3893468..3894232 (+) 765 WP_086023215.1 hypothetical protein -
  D1369_RS17705 - 3894321..3895997 (-) 1677 WP_118082522.1 sigma-70 family RNA polymerase sigma factor -
  D1369_RS17710 radA/sms 3896228..3897637 (+) 1410 WP_007383788.1 DNA repair protein RadA Machinery gene
  D1369_RS17715 disA 3897719..3898843 (+) 1125 WP_007383787.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  D1369_RS17720 - 3898959..3899828 (-) 870 WP_082319440.1 hypothetical protein -
  D1369_RS17725 - 3900293..3901255 (+) 963 WP_007383785.1 A/G-specific adenine glycosylase -
  D1369_RS17730 - 3901493..3902035 (+) 543 WP_007383784.1 SigE family RNA polymerase sigma factor -
  D1369_RS17735 - 3902020..3902697 (+) 678 WP_007383783.1 hypothetical protein -
  D1369_RS17740 cseB 3902764..3903468 (+) 705 WP_007383782.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40136.89 Da        Isoelectric Point: 4.9235

>NTDB_id=273833 D1369_RS17715 WP_007383787.1 3897719..3898843(+) (disA) [Streptomyces sp. CC0208]
MAANDRAAAPGKSGGSAGSDGLMRASLSAVAPGTPLRDGLERVLRGNTGGLIVLGFDKTVETMCTGGFVLDVEFAATRLR
ELCKLDGGIVLSSDLSKILRAGVQFVPDATIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVEEALYELDALTHAELLELPTVARALGYTGSPEAIDSGVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=273833 D1369_RS17715 WP_007383787.1 3897719..3898843(+) (disA) [Streptomyces sp. CC0208]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTTCCGATGGCCTGATGCGCGCCTCCCT
GAGCGCCGTGGCCCCCGGCACCCCCCTGCGCGACGGCCTCGAGCGGGTGCTGCGCGGCAACACCGGCGGACTGATCGTGC
TCGGCTTCGACAAGACCGTGGAGACGATGTGCACGGGCGGTTTCGTCCTGGACGTCGAGTTCGCGGCCACGCGCCTGCGT
GAGCTGTGCAAGCTGGACGGCGGCATCGTGCTCTCGTCCGACCTGTCGAAGATCCTGCGGGCGGGCGTGCAGTTCGTGCC
CGACGCGACGATCCCGACGGAGGAGACGGGCACCCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGGCTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTCATCGCGCTGTACGTCGACGGGCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCGAACCAGGCTCTTGCGACCCTGGAGCGCTACAAGCTGCGCCTGGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTCGTGACGGTCCGGGACGTCTCGGCCGTGGCCCAGCGCCTGGAGATGGTCCGCCGTATCG
CGACCGAGATCGCCGAGTACGTGGTCGAGCTCGGCACGGACGGTCGCCTTCTGGCCCTCCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCGGAACGCGAACTGGTGGTCCGGGACTACGTCCCCGAGCCCACGGCGAAGCGCTCCCGCACGGTCGAGGA
GGCGCTGTACGAACTGGACGCGCTGACCCACGCCGAGCTTCTCGAACTGCCCACCGTGGCCCGCGCCCTGGGCTACACCG
GCTCCCCCGAGGCGATCGACTCGGGTGTCTCTCCGCGGGGCTTCCGCCTCCTGGCCAAGGTCCCCCGTCTGCCCGGCGCG
ATCATCGACCGCCTGGTGGAACACTTCGGCGGTCTCCAGAAGCTGCTGGCAGCCAGCGTCGACGACCTCCAGACGGTGGA
CGGAGTGGGCGAGGCAAGGGCGAGGAGCGTCAGAGAGGGCCTGTCCCGCCTGGCGGAGAGCTCGATCCTGGAACGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB B5HYI1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.821

92.513

0.433