Detailed information NTG0027343

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: USA300HOU_RS04055
• Genome accession: NC_010079
• Coordinates: 828449..829531 (+)
• Length: 360 a.a.
• NCBI ID: WP_001548033.1
• Uniprot ID: A0A0H2XJ41
• Organism: Staphylococcus aureus subsp. aureus USA300_TCH1516
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 823449..834531

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
USA300HOU_RS04035 (USA300HOU_0773)	-	823821..824891 (-)	1071	WP_000460983.1	GGDEF domain-containing protein	-
USA300HOU_RS04040 (USA300HOU_0774)	-	825209..826264 (+)	1056	WP_000258151.1	MraY family glycosyltransferase	-
USA300HOU_RS04045 (USA300HOU_0775)	-	826434..827075 (-)	642	WP_000192947.1	YigZ family protein	-
USA300HOU_RS04050 (USA300HOU_0776)	fakB1	827219..828085 (+)	867	WP_000686342.1	fatty acid kinase binding subunit FakB1	-
USA300HOU_RS04055 (USA300HOU_0777)	comFA	828449..829531 (+)	1083	WP_001548033.1	DEAD/DEAH box helicase	Machinery gene
USA300HOU_RS04060 (USA300HOU_0778)	-	829524..830198 (+)	675	WP_001057965.1	ComF family protein	-
USA300HOU_RS04065 (USA300HOU_0779)	raiA	830259..830831 (+)	573	WP_000617735.1	ribosome-associated translation inhibitor RaiA	-
USA300HOU_RS04070 (USA300HOU_0780)	secA	831245..833776 (+)	2532	WP_000506531.1	preprotein translocase subunit SecA	-
USA300HOU_RS04075 (USA300HOU_0781)	-	833818..833922 (+)	105	WP_001790092.1	hypothetical protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42111.65 Da
• Isoelectric Point: 9.8307

>NTDB_id=27343 USA300HOU_RS04055 WP_001548033.1 828449..829531(+) (comFA) [Staphylococcus aureus subsp. aureus USA300_TCH1516]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRKRQTILLYAVTGAGKTEMMFQGIQYARIQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSRQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKNLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNKKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=27343 USA300HOU_RS04055 WP_001548033.1 828449..829531(+) (comFA) [Staphylococcus aureus subsp. aureus USA300_TCH1516]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAAAGAGACAAACGATTTTGTTATATGCCGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGAATACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGACAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAATTTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACAATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGTTATTTCAAACTTAATAATAAGAAGATTCAGA
AAATGTTATACCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATACGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACATTTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGGGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAG
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

• Type III restriction enzyme, res subunit (ResIII) (25-173)

3D structure

• AlphaFold DB: A0A0H2XJ41

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	38.938	94.167	0.367