Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   USA300HOU_RS01910 Genome accession   NC_010079
Coordinates   414922..415767 (+) Length   281 a.a.
NCBI ID   WP_001550052.1    Uniprot ID   A0A0H2XGE1
Organism   Staphylococcus aureus subsp. aureus USA300_TCH1516     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 409922..420767
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  USA300HOU_RS01895 (USA300HOU_0378) - 410188..412029 (-) 1842 WP_000077318.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  USA300HOU_RS01900 (USA300HOU_0379) metC 411998..413158 (-) 1161 WP_000175846.1 cystathionine beta-lyase MetC -
  USA300HOU_RS01905 (USA300HOU_0380) - 413155..414258 (-) 1104 WP_000655692.1 PLP-dependent transferase -
  USA300HOU_RS01910 (USA300HOU_0381) spo0J 414922..415767 (+) 846 WP_001550052.1 ParB/RepB/Spo0J family partition protein Regulator
  USA300HOU_RS01915 (USA300HOU_0382) - 415924..416805 (+) 882 WP_001077602.1 mechanosensitive ion channel family protein -
  USA300HOU_RS01920 (USA300HOU_0383) - 416835..417038 (+) 204 WP_000157345.1 DUF951 domain-containing protein -
  USA300HOU_RS01925 (USA300HOU_0384) ychF 417050..418147 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  USA300HOU_RS01930 (USA300HOU_0385) - 418233..418424 (-) 192 WP_001052483.1 hypothetical protein -
  USA300HOU_RS01935 (USA300HOU_0387) rpsF 418668..418964 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  USA300HOU_RS01940 (USA300HOU_0388) ssbA 418985..419488 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  USA300HOU_RS01945 (USA300HOU_0389) rpsR 419540..419782 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence


Protein


Download         Length: 281 a.a.        Molecular weight: 32855.86 Da        Isoelectric Point: 10.0091

>NTDB_id=27331 USA300HOU_RS01910 WP_001550052.1 414922..415767(+) (spo0J) [Staphylococcus aureus subsp. aureus USA300_TCH1516]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGTKVDISIKKSVGKISFEFDSQEDFVRIIEQLNRRYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=27331 USA300HOU_RS01910 WP_001550052.1 414922..415767(+) (spo0J) [Staphylococcus aureus subsp. aureus USA300_TCH1516]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGAATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAACGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTGCCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTCAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAGCAAGAACGACAGTTGCGA
GAACAGTATGGTACCAAAGTAGATATATCAATAAAAAAATCGGTTGGTAAAATCTCATTTGAGTTTGATTCACAAGAAGA
TTTTGTGAGAATAATTGAACAATTAAATCGTAGGTATGGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2XGE1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.379

92.883

0.384


Multiple sequence alignment