Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   VEIS_RS14690 Genome accession   NC_008786
Coordinates   3375986..3376387 (-) Length   133 a.a.
NCBI ID   WP_041950893.1    Uniprot ID   -
Organism   Verminephrobacter eiseniae EF01-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3370986..3381387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VEIS_RS14675 (Veis_3018) - 3372753..3375056 (-) 2304 WP_011810746.1 methyl-accepting chemotaxis protein -
  VEIS_RS14680 (Veis_3019) - 3375078..3375605 (-) 528 WP_011810747.1 chemotaxis protein CheW -
  VEIS_RS14685 (Veis_3020) - 3375621..3375986 (-) 366 WP_011810748.1 PleD family two-component system response regulator -
  VEIS_RS14690 (Veis_3021) pilG 3375986..3376387 (-) 402 WP_041950893.1 PleD family two-component system response regulator Regulator
  VEIS_RS14695 (Veis_3022) - 3376444..3376617 (-) 174 WP_011810750.1 rubredoxin -
  VEIS_RS14700 (Veis_3023) - 3376736..3377698 (+) 963 WP_011810751.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  VEIS_RS14705 (Veis_3024) hemL 3377682..3378995 (+) 1314 WP_011810752.1 glutamate-1-semialdehyde 2,1-aminomutase -
  VEIS_RS14710 (Veis_3025) purH 3379058..3380662 (-) 1605 WP_011810753.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  VEIS_RS30605 - 3380718..3381032 (-) 315 WP_232287703.1 hypothetical protein -
  VEIS_RS14715 (Veis_3026) - 3381128..3381361 (-) 234 WP_011810754.1 Fis family transcriptional regulator -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14929.32 Da        Isoelectric Point: 7.7458

>NTDB_id=27314 VEIS_RS14690 WP_041950893.1 3375986..3376387(-) (pilG) [Verminephrobacter eiseniae EF01-2]
MIKTFKVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFADTP
VVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVLQFGQKIDHSQQGAM

Nucleotide


Download         Length: 402 bp        

>NTDB_id=27314 VEIS_RS14690 WP_041950893.1 3375986..3376387(-) (pilG) [Verminephrobacter eiseniae EF01-2]
TTGATCAAAACATTCAAAGTGCTCGTGGTGGATGACAGCAACACCATCCGCCGAAGTGCAGAGATTTTTCTCAAGCAGGG
GGGGCACGAAGTGCTGCTGGCCGACGATGGCTTCGATGCCTTGGCCAAAGTCAACGATTATCAGCCGCAGCTGATTTTCT
GCGACATCCTGATGCCCAAGCTCGACGGTTACCAGACTTGCGCCATCATCAAACGCAACGCCCGTTTTGCCGATACCCCG
GTGGTCATGCTGTCGTCCAAAGACGGTGTGTTCGACAAGGCACGCGGGCGCATGGTCGGCTGCCAGGAATATCTCACCAA
ACCGTTCACCAAAGACCAGCTCTTGCAAGCTGTCCTGCAGTTTGGTCAGAAGATTGACCATTCCCAACAAGGAGCGATGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-118)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

57.759

87.218

0.504

Multiple sequence alignment