Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C5F71_RS10820 Genome accession   NZ_CP026881
Coordinates   2246967..2247374 (-) Length   135 a.a.
NCBI ID   WP_029300456.1    Uniprot ID   -
Organism   Pseudomonas sp. LG1D9     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2241967..2252374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5F71_RS10805 - 2243960..2246011 (-) 2052 WP_029300448.1 methyl-accepting chemotaxis protein -
  C5F71_RS10810 - 2246008..2246544 (-) 537 WP_029300451.1 chemotaxis protein CheW -
  C5F71_RS10815 pilH 2246557..2246922 (-) 366 WP_029300454.1 twitching motility response regulator PilH -
  C5F71_RS10820 pilG 2246967..2247374 (-) 408 WP_029300456.1 twitching motility response regulator PilG Regulator
  C5F71_RS10825 gshB 2247614..2248567 (+) 954 WP_076963168.1 glutathione synthase -
  C5F71_RS10830 - 2248645..2249544 (+) 900 WP_029300459.1 energy transducer TonB -
  C5F71_RS10840 - 2249735..2250304 (+) 570 WP_029300463.1 YqgE/AlgH family protein -
  C5F71_RS10845 ruvX 2250304..2250741 (+) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  C5F71_RS10850 pyrR 2250824..2251330 (+) 507 WP_029300467.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  C5F71_RS10855 - 2251355..2252359 (+) 1005 WP_029300469.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14978.47 Da        Isoelectric Point: 6.9682

>NTDB_id=273060 C5F71_RS10820 WP_029300456.1 2246967..2247374(-) (pilG) [Pseudomonas sp. LG1D9]
MEQHSNALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
DIPVIMLSSRDGLFDKAKGRIVGVDQFLTKPFSKEELLSAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=273060 C5F71_RS10820 WP_029300456.1 2246967..2247374(-) (pilG) [Pseudomonas sp. LG1D9]
ATGGAACAGCATTCCAACGCCTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGCCGCACCGCTGAAACGCTGTT
GAAGAACGTAGGGTGCGAAGTCATCACGGCCATCGACGGTTTTGATGCTCTGGCCAGGATCGTTGACCATCACCCGCACA
TCATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGGTCAAGAACAACCCGGCGTTCAAG
GACATCCCGGTGATCATGCTGTCGTCCAGGGATGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCGTCGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAGTGCGATCAAGGCCTATGTGCCGGGTTTCGCCGCAGTAGAACAAG
CACATTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.2

92.593

0.659

Multiple sequence alignment