Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   D1O36_RS05555 Genome accession   NZ_CP031881
Coordinates   1011626..1012108 (-) Length   160 a.a.
NCBI ID   WP_011681193.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ST106     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1006626..1017108
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D1O36_RS05535 (D1O36_05565) pepT 1007107..1008330 (-) 1224 WP_011681190.1 peptidase T -
  D1O36_RS05540 (D1O36_05570) lepB 1008538..1009095 (-) 558 WP_011681191.1 signal peptidase I -
  D1O36_RS05545 (D1O36_05575) - 1009218..1010447 (-) 1230 WP_134973267.1 tetratricopeptide repeat protein -
  D1O36_RS05550 (D1O36_05580) - 1010437..1011615 (-) 1179 WP_134973268.1 AI-2E family transporter -
  D1O36_RS05555 (D1O36_05585) mutX 1011626..1012108 (-) 483 WP_011681193.1 8-oxo-dGTP diphosphatase Machinery gene
  D1O36_RS05560 (D1O36_05590) ftsX 1012264..1013193 (-) 930 WP_011681194.1 permease-like cell division protein FtsX -
  D1O36_RS05565 (D1O36_05595) ftsE 1013186..1013878 (-) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  D1O36_RS05575 (D1O36_05605) queG 1015117..1016235 (-) 1119 WP_011226076.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18885.35 Da        Isoelectric Point: 4.7200

>NTDB_id=272579 D1O36_RS05555 WP_011681193.1 1011626..1012108(-) (mutX) [Streptococcus thermophilus strain ST106]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLESGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=272579 D1O36_RS05555 WP_011681193.1 1011626..1012108(-) (mutX) [Streptococcus thermophilus strain ST106]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAATCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706

Multiple sequence alignment