Detailed information NTG0272376

Bioinformatically predicted

Overview

• Name: recR
• Type: Machinery gene
• Locus tag: D1097_RS00395
• Genome accession: NZ_CP031873
• Coordinates: 85374..85979 (-)
• Length: 201 a.a.
• NCBI ID: WP_005620263.1
• Uniprot ID: A3MYE6
• Organism: Actinobacillus pleuropneumoniae serovar 4 str. M62
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 80374..90979

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D1097_RS00365 (D1097_00365)	-	81122..82111 (+)	990	WP_005603245.1	peptide ABC transporter ATP-binding protein	-
D1097_RS00370 (D1097_00370)	psiE	82184..82594 (-)	411	WP_005595704.1	phosphate-starvation-inducible protein PsiE	-
D1097_RS00375 (D1097_00375)	-	82672..83304 (-)	633	WP_005603246.1	hypothetical protein	-
D1097_RS00380 (D1097_00380)	-	83359..83703 (-)	345	WP_005595710.1	RidA family protein	-
D1097_RS00385 (D1097_00385)	-	83790..84827 (-)	1038	WP_005603248.1	branched-chain amino acid aminotransferase	-
D1097_RS00390 (D1097_00390)	grxD	84970..85302 (-)	333	WP_005600046.1	Grx4 family monothiol glutaredoxin	-
D1097_RS00395 (D1097_00395)	recR	85374..85979 (-)	606	WP_005620263.1	recombination mediator RecR	Machinery gene
D1097_RS00400 (D1097_00400)	-	86050..86379 (-)	330	WP_005600053.1	YbaB/EbfC family nucleoid-associated protein	-
D1097_RS00405 (D1097_00405)	-	86548..87405 (-)	858	WP_005595716.1	energy transducer TonB family protein	-
D1097_RS00410 (D1097_00410)	exbD	87415..87804 (-)	390	WP_005595717.1	TonB system transport protein ExbD	-
D1097_RS00415 (D1097_00415)	exbB	87849..88301 (-)	453	WP_005595719.1	TonB-system energizer ExbB	-
D1097_RS00420 (D1097_00420)	glpE	88489..88815 (+)	327	WP_005595720.1	thiosulfate sulfurtransferase GlpE	-
D1097_RS00425 (D1097_00425)	-	88859..89704 (+)	846	WP_005603255.1	co-chaperone YbbN	-
D1097_RS00430 (D1097_00430)	dhaM	89777..90184 (-)	408	WP_005600064.1	dihydroxyacetone kinase phosphoryl donor subunit DhaM	-
D1097_RS00435 (D1097_00435)	dhaL	90193..90819 (-)	627	WP_005600065.1	dihydroxyacetone kinase subunit DhaL	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22168.37 Da
• Isoelectric Point: 6.4865

>NTDB_id=272376 D1097_RS00395 WP_005620263.1 85374..85979(-) (recR) [Actinobacillus pleuropneumoniae serovar 4 str. M62]
MQISPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGINLSKALNEAMTHIGHCRSCRTFTEEDECNICKNPRRQMS
GQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQSRLENESFHEVILATNPTIEGDATANYIAEM
CRIHNVKVTRIAHGIPVGGSLEMVDGTTLSHSFAGRRDVSL

Nucleotide

• Length: 606 bp

>NTDB_id=272376 D1097_RS00395 WP_005620263.1 85374..85979(-) (recR) [Actinobacillus pleuropneumoniae serovar 4 str. M62]
ATGCAAATTAGCCCTTTACTCGAAAATCTGATGGAAGCCCTACGTGCATTACCCGGCGTCGGTCCGAAATCCGCACAACG
TATGGCGTATCATTTATTGCAACGCAATCGTTCCGGCGGTATCAATTTATCCAAAGCCTTAAATGAAGCGATGACGCATA
TCGGTCATTGCCGTTCTTGCCGTACTTTTACCGAAGAAGACGAATGCAATATTTGTAAAAATCCTCGTCGCCAAATGAGC
GGTCAGCTTTGCGTAGTAGAAATGCCGGAAGATATTCAAGCGATTGAACAAACCGGACAGTTTTCGGGACGTTATTTCGT
ATTAATGGGACATCTTTCACCGCTAGACGGTATCGGACCGAGAGAAATCGGCTTGGATTTGTTACAAAGCCGTTTAGAAA
ACGAATCTTTTCACGAAGTTATTCTAGCTACCAATCCGACCATTGAAGGTGATGCCACCGCCAACTATATTGCGGAAATG
TGCCGCATTCACAACGTGAAAGTAACTCGAATTGCGCATGGGATTCCGGTCGGCGGTTCATTAGAAATGGTGGACGGTAC
GACCCTTTCCCACTCTTTTGCCGGCAGACGAGATGTTTCGTTATAA

Domains

Predicted by InterProScan.

• Toprim domain (Toprim_4) (82-172)

• RecR protein (RecR_ZnF) (42-77)

3D structure

• AlphaFold DB: A3MYE6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recR	Bacillus subtilis subsp. subtilis str. 168	42.714	99.005	0.423
recR	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.5	99.502	0.423