Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   AM457_RS01030 Genome accession   NZ_CP026761
Coordinates   240559..245070 (-) Length   1503 a.a.
NCBI ID   WP_104889640.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain AR_0078     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 235559..250070
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AM457_RS01005 (AM457_01005) - 236022..236165 (+) 144 WP_001984826.1 entericidin A/B family lipoprotein -
  AM457_RS01010 (AM457_01010) dapE 236291..237424 (+) 1134 WP_001016572.1 succinyl-diaminopimelate desuccinylase -
  AM457_RS01015 (AM457_01015) - 237562..238443 (-) 882 WP_000022126.1 alpha/beta fold hydrolase -
  AM457_RS01020 (AM457_01020) - 238451..239842 (-) 1392 WP_000355862.1 coproporphyrinogen-III oxidase family protein -
  AM457_RS01025 (AM457_01025) - 240098..240562 (-) 465 WP_000678927.1 hypothetical protein -
  AM457_RS01030 (AM457_01030) chpA 240559..245070 (-) 4512 WP_104889640.1 hybrid sensor histidine kinase/response regulator Regulator
  AM457_RS01035 (AM457_01035) - 245217..247295 (-) 2079 WP_000505934.1 methyl-accepting chemotaxis protein -
  AM457_RS01040 (AM457_01040) - 247342..247878 (-) 537 WP_000729759.1 chemotaxis protein CheW -
  AM457_RS01045 (AM457_01045) - 247939..248301 (-) 363 WP_000101096.1 response regulator -
  AM457_RS01050 (AM457_01050) pilG 248325..248708 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  AM457_RS01055 (AM457_01055) - 248991..249629 (+) 639 WP_002027721.1 hypothetical protein -

Sequence

Protein


Download         Length: 1503 a.a.        Molecular weight: 171246.43 Da        Isoelectric Point: 4.3506

>NTDB_id=272257 AM457_RS01030 WP_104889640.1 240559..245070(-) (chpA) [Acinetobacter baumannii strain AR_0078]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFIEEIFVDLQPLINKWMQSENIATLTEIRRHFHTLKGSGRMIGAKSSAELA
WTVEDTLNRVINQSLQLTPTIQSYVQLVFKFYFLKLVDNFKQKRAHTLDFRPLILLGQQLQQQQSLEPALEELLQLSNTL
TAETVTGLELGYIEQDSLAEPIIQTTHTEIEINLDETLTLFMEEAEEHLATIHQFLDQELHQYDSYNALIRALHTLRGSS
AMAQVETIFEASTKVEHLFKILLQEELSSHSEEILLLQEYREFVRDSLELLSRYSSSEQLEARLQQFNQSWDAYVEQHGD
RTDPLMPSHGLVSQLLQLDVSELLDAELDFEKGIRNEFPDYLERLSEQANLLLQHTHSQAMLGLHEYTSQLKESYEVLLD
KPALLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGVVKQHQSILEELKLYTQYTPDLSNDLPQQDSTSFEPISNIEPEPE
VVATVENFSDSADWAVLGQSVQQDRQYISSTQVNRNFDADLLDIFLEEAEELLEGIDTDLNIWVGEQENFAALNNLMRYL
HTLKGGANMVQATYLGLIAHELESIYERLIQKQLVATSDLIDFIRLVQDDLADRLQIMREQQLDYAAPYTINALKRAGQN
SNFQPLSVVDAFDTESEIFSEQEVISEVIIDEIPVELEPALAELEAHHDQVFDTAVTELATPVEVITSVTSQENRVAANE
QDIEAVVEQTFLEEATELLEMAESLLKQWFEQRTNRSILLQLQRAMHSLKGGARMVGLEAVQAIAYQLENAFEQFALHHF
NSNIYDHLLESAIAWLKDAIFNHNYQHFDGLQQSLENIQFFETTIQIPTKLTRADLFSSEPVMTFIQGDGTEPPPMMGAW
EQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFSHTLVEMELAIQRLADQLRRMEGELETQIIAKHGIE
HSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSDKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLLPRLQ
RIVRQTSTALNRPAELFVNNTEGELDRNILERLVIPLEHMLRNAIDHGLEDRAQRQQANKPETGRIELNIQRQGTDVVVV
FSDDGQGIDVEKVRQKALLAGLIKPEQDLEQQDILQLIFHPGLSTAEQVTQISGRGVGLDVVQSDIKSLGGHVSVESVYG
QGTTFMIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIIRVSPASLEQYFESPQELFEYENRRYPLRYLSEFVGNQPIPR
LNGVMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTQRH
KQLSEAVYRHRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFEVLN
LVRHHDIHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVASDSEVKS

Nucleotide


Download         Length: 4512 bp        

>NTDB_id=272257 AM457_RS01030 WP_104889640.1 240559..245070(-) (chpA) [Acinetobacter baumannii strain AR_0078]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAGATCTTCATTGAAGAGATTTTTGTTGATTTGCAACCTTTGATAAATAAATGGATGCAGTCTGAGAATATTGCTACGC
TCACTGAAATTCGTCGTCATTTCCATACCTTAAAAGGTTCCGGAAGAATGATTGGCGCTAAATCTTCAGCTGAGCTTGCG
TGGACAGTTGAAGATACACTCAACCGGGTAATCAACCAAAGCTTACAATTAACGCCAACTATCCAGAGCTATGTGCAGTT
AGTATTTAAGTTCTATTTCCTTAAATTAGTAGATAATTTTAAGCAAAAACGAGCACATACCTTAGATTTCAGACCTCTTA
TTTTATTAGGCCAACAACTACAACAACAGCAAAGTTTAGAACCAGCTTTAGAAGAGCTTTTACAACTTTCAAATACGCTT
ACGGCCGAAACAGTGACTGGTCTTGAGCTAGGTTATATCGAACAAGATTCGTTAGCCGAGCCAATCATTCAAACTACACA
TACTGAAATTGAAATAAATCTAGATGAAACCTTGACCTTATTTATGGAAGAGGCAGAAGAACATTTAGCCACGATCCATC
AATTCTTAGATCAAGAGTTACATCAGTACGACAGTTATAACGCTTTAATCCGCGCTTTACATACTTTGCGTGGTAGTTCT
GCAATGGCGCAGGTCGAAACAATTTTCGAGGCCAGTACCAAAGTTGAGCATTTATTTAAAATACTGCTGCAAGAAGAGTT
ATCTTCTCACTCTGAAGAAATTTTATTATTACAAGAATATCGTGAGTTTGTTCGAGATAGCTTGGAACTACTATCTAGAT
ATAGTTCAAGTGAACAGCTCGAAGCGAGATTGCAGCAATTTAATCAATCTTGGGATGCATATGTTGAGCAACATGGTGAC
CGAACAGATCCGTTAATGCCTTCTCATGGTTTGGTATCACAATTATTACAATTAGATGTTTCTGAATTACTGGATGCAGA
ATTAGATTTTGAGAAGGGTATTCGTAATGAGTTTCCTGATTATCTTGAACGCCTAAGTGAACAGGCTAACTTATTACTGC
AACATACACATTCTCAAGCAATGCTGGGTTTACATGAATATACCAGCCAACTGAAAGAAAGTTATGAAGTACTGCTTGAT
AAACCTGCGTTATTACAATCAGACTATATATTTGAAATTTATCAAAAAGCACATCAACAGCTCATTCAATTATTTGATGC
TTTAGCTGCTGGTCAGCGAGTGGGTGTTGTTAAGCAACATCAAAGTATTTTAGAAGAATTAAAACTTTATACGCAGTACA
CTCCAGACCTATCAAATGACCTGCCTCAGCAGGATTCGACATCTTTTGAACCAATATCTAATATTGAACCAGAGCCAGAA
GTAGTAGCTACTGTAGAGAATTTCTCAGACTCTGCAGACTGGGCGGTATTAGGTCAAAGTGTGCAGCAAGATCGACAATA
TATTTCATCTACACAAGTGAATCGAAATTTTGATGCTGATCTTTTAGATATCTTTCTTGAGGAAGCTGAAGAATTACTTG
AGGGAATTGATACCGATCTTAATATTTGGGTAGGTGAGCAAGAAAACTTTGCAGCTCTGAACAATCTAATGCGTTATTTG
CATACCTTGAAAGGGGGCGCAAATATGGTTCAGGCAACGTATCTTGGTTTGATTGCCCATGAATTAGAAAGCATCTATGA
GCGTTTAATTCAAAAGCAATTAGTGGCAACTTCAGATTTAATTGATTTTATTCGTTTGGTTCAAGATGACTTGGCTGACC
GTTTACAAATCATGCGTGAACAACAACTAGATTATGCAGCCCCTTACACAATTAACGCATTAAAACGAGCGGGTCAAAAC
TCTAACTTCCAACCTTTATCAGTGGTTGACGCATTTGATACTGAAAGTGAGATATTCTCTGAGCAAGAGGTGATATCTGA
AGTAATAATAGATGAGATACCAGTAGAACTTGAGCCTGCTCTTGCAGAATTAGAAGCTCATCACGATCAGGTATTCGATA
CAGCGGTTACCGAGTTAGCTACTCCAGTTGAAGTGATTACCTCGGTTACATCGCAAGAGAATAGAGTTGCAGCTAATGAA
CAGGACATTGAGGCTGTTGTTGAACAGACGTTCCTAGAAGAAGCTACTGAATTGTTAGAAATGGCTGAGTCGCTATTAAA
ACAATGGTTTGAACAGCGTACAAACCGTAGTATTTTGCTTCAGCTACAAAGAGCCATGCACAGTTTGAAAGGTGGTGCAC
GAATGGTGGGTTTAGAAGCCGTACAAGCAATTGCCTACCAACTAGAAAATGCTTTTGAACAATTTGCGCTACATCACTTC
AATTCGAATATTTATGATCATTTATTAGAAAGTGCGATTGCATGGTTAAAAGATGCAATTTTCAACCACAATTATCAGCA
TTTCGATGGATTACAGCAAAGTTTAGAAAATATTCAATTCTTTGAAACTACAATCCAGATTCCGACTAAGTTAACTAGAG
CGGACTTGTTTAGCTCAGAACCAGTGATGACCTTTATACAAGGTGATGGTACAGAGCCTCCACCAATGATGGGTGCATGG
GAGCAAACAGAGCGTCTGGATCAGAATAATGAAATGATCCGTGTTTCAGCCGACTTAATCGAGAAAATGATTGATTTGTC
TGGTGAAAACTCCATTAACCGTTCACGAATTGAAATGGACCTAAGCCAGTTTAGCCATACACTAGTTGAAATGGAGTTGG
CGATTCAACGACTTGCCGATCAGTTACGACGAATGGAAGGTGAGTTAGAAACACAGATTATTGCTAAACATGGAATTGAA
CATTCTCGTTATACCGACTTTGATCCGTTAGAGATGGACCAGTATTCATCTTTAAATCAATTGTCGAAATCGCTTGCTGA
ATCTGCATCGGACTTGGTCGACTTTAAAAATACGTTATCTGACAAGATCAGAGATACCGAAAGTTTGCTTTTACAACAAT
CACGAATTCAAGCGGAAATTCAAGAAGGTTTAATGCGGACACGTTTGGTCCCATTTTCGCGTTTATTGCCGCGTTTACAA
CGAATTGTTCGTCAGACATCTACAGCATTGAATAGACCTGCTGAGCTTTTCGTAAATAATACAGAGGGTGAGTTGGACCG
CAACATTTTAGAACGGTTAGTGATTCCGCTTGAGCATATGCTCAGAAACGCAATTGACCATGGTTTAGAGGACCGAGCGC
AGCGGCAACAAGCAAATAAACCGGAAACAGGGCGTATTGAACTTAATATTCAGCGTCAAGGTACGGATGTTGTGGTTGTC
TTTAGTGATGATGGTCAAGGCATTGATGTTGAAAAAGTACGTCAGAAAGCACTCCTTGCCGGATTGATCAAGCCAGAACA
AGACTTAGAACAGCAAGACATACTGCAACTCATTTTCCATCCGGGTTTAAGTACAGCAGAGCAAGTCACTCAGATTTCCG
GACGTGGTGTAGGTCTTGATGTCGTGCAGAGTGATATTAAGTCTTTGGGTGGACATGTCAGCGTTGAATCCGTCTATGGG
CAGGGAACAACATTTATGATTCGTGTACCGACTACAGTAGCGGTAAGTGATGCCTTAATGGTTAAAGTGGCAGATCAACA
ATTTGCGATTCCACTTGCTCAAATCGATCGAATTATTCGAGTGTCACCAGCCTCTTTAGAGCAGTATTTTGAAAGTCCTC
AAGAACTATTTGAGTATGAAAATAGACGTTATCCATTACGTTATCTTTCAGAATTTGTTGGCAACCAACCCATACCACGT
TTAAATGGTGTGATGTATTCATTACCTGTGTTAATGATTAAAGCCAATAATGGCCAAACTGTGGCATTACTTGTTGACCA
GTTAATTGGCTCTCGAGCACAAATTGTAGTGAAACCAATTGGTCAACAGTTCTCTAGCATTGGAGCAATTGCAGGCGCCA
CAATTTTAGGTGACGGACAGGTCTGCTTAATTTTAGATGGACAAAATATTGCGCGACAAATTCAGTCAACTCAGCGTCAT
AAACAACTTAGTGAAGCAGTGTATAGACACCGAGAGTCTGATGAACGCCGCCTCATCATGATTGTAGATGACTCAGTAAC
TGTACGTAAGGTCACGTCCCGATTGCTTGAACGTCAAGGCTATGATGTGGTTACGGCTAAAGATGGTGTTGACGCCATAG
AGCAGCTAGAAAATATTAAGCCAGATTTGATGCTACTTGATATTGAAATGCCACGTATGGATGGTTTTGAGGTTCTCAAT
CTTGTACGACATCATGATATTCATCAATACATGCCAATTATTATGATTACATCCAGAACAGGCGAAAAACATCGTGAACG
AGCATTCTCGTTAGGTGTAAGTCAATATATGGGTAAACCTTTCCAGGAAGAAGAGTTACTAGAGAATATCGATGCTTTAC
TTGTAGCGTCTGACAGTGAGGTCAAATCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1379-1490)

Hpt domain (Hpt)

(520-609)

Hpt domain (Hpt)

(25-103)

Hpt domain (Hpt)

(729-793)

Hpt domain (Hpt)

(196-278)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1075-1211)

CheW-like domain (CheW)

(1218-1353)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

98.008

100

0.982

Multiple sequence alignment