Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   D1102_RS06075 Genome accession   NZ_CP031865
Coordinates   1335140..1335772 (+) Length   210 a.a.
NCBI ID   WP_005608326.1    Uniprot ID   A3N1B4
Organism   Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1330140..1340772
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D1102_RS06065 (D1102_06075) purT 1331205..1332386 (-) 1182 WP_005610416.1 formate-dependent phosphoribosylglycinamide formyltransferase -
  D1102_RS06070 (D1102_06080) plsB 1332509..1334983 (-) 2475 WP_005610418.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -
  D1102_RS06075 (D1102_06085) dinR/lexA 1335140..1335772 (+) 633 WP_005608326.1 transcriptional repressor LexA Regulator
  D1102_RS06080 (D1102_06090) mutH 1335832..1336512 (+) 681 WP_005610420.1 DNA mismatch repair endonuclease MutH -
  D1102_RS06085 (D1102_06095) - 1336598..1337329 (+) 732 WP_005597990.1 TerC family protein -
  D1102_RS06090 (D1102_06100) nagZ 1337444..1338481 (+) 1038 WP_043993299.1 beta-N-acetylhexosaminidase -
  D1102_RS06095 (D1102_06105) rlmC 1338562..1339737 (+) 1176 WP_005597991.1 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC -

Sequence

Protein


Download         Length: 210 a.a.        Molecular weight: 23368.76 Da        Isoelectric Point: 5.8460

>NTDB_id=272239 D1102_RS06075 WP_005608326.1 1335140..1335772(+) (dinR/lexA) [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261]
MSRKHLTARQQEIFDFVKHHIETTGMPPTRVEIAREIGFKSPNAAEEHLKALARKGYIEMLSGTSRGIRILVDNEETAAN
DDGLPLIGKVAAGTPIMAIEHVESHYPVNGAMFNPNADYLLKVNGNSMEKIGILDGDLLAVHKTNFARNGQVVVARVDDE
VTVKRLEKKGDLIYLHPENDELQPIIVDPRIEYIEIEGIAVGVIRNNAWM

Nucleotide


Download         Length: 633 bp        

>NTDB_id=272239 D1102_RS06075 WP_005608326.1 1335140..1335772(+) (dinR/lexA) [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261]
ATGTCACGTAAACACTTAACGGCTCGTCAGCAAGAAATTTTTGATTTTGTTAAACATCACATAGAAACCACCGGTATGCC
GCCGACTCGTGTTGAAATTGCAAGAGAAATCGGTTTTAAATCGCCGAATGCGGCAGAAGAACACTTAAAAGCATTGGCGC
GTAAAGGTTATATCGAAATGCTTTCCGGTACATCGCGCGGAATTCGTATTTTAGTCGATAACGAAGAAACTGCGGCAAAT
GACGACGGTTTACCGTTAATCGGCAAAGTGGCTGCCGGTACGCCGATTATGGCGATTGAACATGTGGAAAGTCATTATCC
GGTAAACGGCGCGATGTTTAATCCGAATGCCGACTATTTGCTCAAAGTAAACGGTAACTCCATGGAAAAAATCGGTATTT
TAGACGGTGACTTACTTGCGGTGCATAAAACCAATTTTGCCCGTAACGGCCAAGTCGTCGTCGCTCGCGTTGATGACGAA
GTGACCGTAAAACGCTTGGAGAAAAAAGGCGATCTTATTTATCTTCATCCTGAAAATGACGAGTTACAACCGATTATTGT
CGATCCTCGTATCGAATATATCGAAATTGAAGGAATCGCCGTCGGTGTAATTCGCAATAATGCTTGGATGTAA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(85-200)

LexA DNA binding domain (LexA_DNA_bind)

(4-67)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3N1B4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

37.864

98.095

0.371

Multiple sequence alignment