Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | C5B74_RS10455 | Genome accession | NZ_CP026750 |
| Coordinates | 2141909..2142289 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain WCHAB005133 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2136909..2147289
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B74_RS10425 (C5B74_10435) | tadA | 2137027..2137530 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| C5B74_RS10430 (C5B74_10440) | - | 2137537..2138661 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| C5B74_RS10435 (C5B74_10445) | ung | 2138658..2139371 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| C5B74_RS10440 (C5B74_10450) | - | 2139422..2140018 (-) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| C5B74_RS10445 (C5B74_10455) | gspK | 2140249..2141208 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| C5B74_RS10450 (C5B74_10460) | xcpW | 2141208..2141909 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| C5B74_RS10455 (C5B74_10465) | xcpV | 2141909..2142289 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| C5B74_RS10460 (C5B74_10470) | - | 2142279..2142833 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| C5B74_RS10465 (C5B74_10475) | - | 2142843..2143451 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| C5B74_RS10470 (C5B74_10480) | - | 2143489..2144262 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| C5B74_RS10475 (C5B74_10485) | - | 2144280..2144621 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| C5B74_RS10480 (C5B74_10490) | - | 2144633..2145613 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| C5B74_RS10485 (C5B74_10495) | kdsB | 2145625..2146386 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=272167 C5B74_RS10455 WP_000836911.1 2141909..2142289(-) (xcpV) [Acinetobacter baumannii strain WCHAB005133]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=272167 C5B74_RS10455 WP_000836911.1 2141909..2142289(-) (xcpV) [Acinetobacter baumannii strain WCHAB005133]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |