Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | C5B74_RS01920 | Genome accession | NZ_CP026750 |
| Coordinates | 337987..338460 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214061.1 | Uniprot ID | A0A219CC01 |
| Organism | Acinetobacter baumannii strain WCHAB005133 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 332987..343460
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B74_RS01895 (C5B74_01905) | - | 333451..335556 (-) | 2106 | WP_001117590.1 | RelA/SpoT family protein | - |
| C5B74_RS01900 (C5B74_01910) | - | 335596..335725 (-) | 130 | Protein_298 | hypothetical protein | - |
| C5B74_RS01905 (C5B74_01915) | rpoZ | 335764..336042 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| C5B74_RS01910 (C5B74_01920) | gmk | 336115..336744 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| C5B74_RS01915 (C5B74_01925) | ispH | 336867..337817 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| C5B74_RS01920 (C5B74_01930) | fimU | 337987..338460 (+) | 474 | WP_001214061.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| C5B74_RS01925 (C5B74_01935) | pilV | 338454..339014 (+) | 561 | WP_085916952.1 | type IV pilus modification protein PilV | Machinery gene |
| C5B74_RS01930 (C5B74_01940) | pilW | 339015..340016 (+) | 1002 | WP_000079200.1 | PilW family protein | Machinery gene |
| C5B74_RS01935 (C5B74_01945) | pilX | 340013..340831 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16836.40 Da Isoelectric Point: 8.5355
>NTDB_id=272151 C5B74_RS01920 WP_001214061.1 337987..338460(+) (fimU) [Acinetobacter baumannii strain WCHAB005133]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILSKLGTLVFKAEENC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILSKLGTLVFKAEENC
Nucleotide
Download Length: 474 bp
>NTDB_id=272151 C5B74_RS01920 WP_001214061.1 337987..338460(+) (fimU) [Acinetobacter baumannii strain WCHAB005133]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGTCCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGTCCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
98.726 |
100 |
0.987 |