Detailed information NTG0027215

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NMC_RS00120
• Genome accession: NC_008767
• Coordinates: 23503..24768 (+)
• Length: 421 a.a.
• NCBI ID: WP_002224230.1
• Uniprot ID: A1KR71
• Organism: Neisseria meningitidis FAM18
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 18503..29768

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMC_RS00100 (NMC0017)	-	19233..20234 (+)	1002	WP_002220087.1	thiamine ABC transporter substrate-binding protein	-
NMC_RS00105 (NMC0018)	-	20328..21176 (+)	849	WP_002215243.1	mechanosensitive ion channel family protein	-
NMC_RS00110 (NMC0019)	-	21203..21688 (+)	486	WP_002215245.1	CinA family protein	-
NMC_RS00115 (NMC0020)	msrAB	21790..23358 (-)	1569	WP_002216163.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
NMC_RS00120 (NMC0021)	pilA	23503..24768 (+)	1266	WP_002224230.1	signal recognition particle-docking protein FtsY	Machinery gene
NMC_RS00125 (NMC0022)	-	25628..26584 (-)	957	WP_002212521.1	IS110-like element ISNgo3 family transposase	-
NMC_RS00130 (NMC0023)	-	26799..27986 (-)	1188	WP_011798737.1	zonular occludens toxin family protein	-
NMC_RS00135 (NMC0024)	-	27987..28271 (-)	285	WP_011798738.1	DUF2523 domain-containing protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 45333.62 Da
• Isoelectric Point: 4.5064

>NTDB_id=27215 NMC_RS00120 WP_002224230.1 23503..24768(+) (pilA) [Neisseria meningitidis FAM18]
MFSFFRRKKKQETPALEEAQIQETAAKAESETDQVIENIKEEVESLTESVKEQVESAVETVSGAVEQVKETVAEMLSEAE
EAAEKAAEQVEAAKEAIAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELET
VLITSDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGK
LAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHL
MEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGV
GEGIDDLRPFDARAFVDALLD

Nucleotide

• Length: 1266 bp

>NTDB_id=27215 NMC_RS00120 WP_002224230.1 23503..24768(+) (pilA) [Neisseria meningitidis FAM18]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCTCAAATTCAGGAAACCGCAGCAAA
AGCAGAGTCCGAAACCGATCAAGTAATTGAAAATATTAAAGAAGAAGTCGAATCTTTAACGGAAAGCGTCAAAGAGCAGG
TCGAATCGGCTGTTGAAACCGTCAGCGGTGCGGTTGAACAAGTAAAGGAAACCGTTGCCGAGATGCTGTCTGAAGCAGAG
GAAGCGGCGGAAAAAGCAGCGGAACAAGTCGAAGCGGCAAAAGAAGCCATTGCCGAAACCGTCGGCGAGGCTGTCGGGCA
AGTTCAAGAAGCCGTTGCAACAACTGAAGAACACAAGCTCGGTTGGGCGGCGCGTTTGAAACAAGGTTTGACCAAATCGC
GCGACAAAATGGCGAAATCGCTGGCGGGCGTGTTCGGCGGCGGACAAATCGACGAGGATTTGTACGAAGAGCTGGAAACC
GTGCTGATTACCAGCGATATGGGCATGGAAGCCACCGAATACCTGATGAAAGACGTGCGCGACCGCGTCAGCCTCAAAGG
GCTGAAAGACGGCAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCTCTGGAAAAACCATTGG
TCTTGCCCGAAACCAAAGAGCCGTTTGTCATCATGCTTGCCGGCATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAA
CTCGCCAAATATTTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCAGGCGACACTTTCCGCGCCGCCGCCCGTGAGCA
GCTTCAGGCATGGGGCGAACGCAACAACGTTACCGTGATTTCGCAAACCACGGGCGATTCCGCCGCCGTGTGCTTCGATG
CCGTCCAAGCCGCCAAAGCGCGCGGCATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTG
ATGGAAGAAATCAAAAAAGTGAAACGCGTGCTGCAAAAAGCCATGCCCGACGCGCCGCACGAAATCATCGTCGTGCTTGA
TGCCAACATCGGGCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTAGGGCTGACCGGTTTAATCGTGACCA
AACTCGACGGCACGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTG
GGCGAAGGCATAGACGATTTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (221-420)

• SRP54-type protein, helical bundle domain (SRP54_N) (136-202)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	93.349	100	0.933