Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C4Q28_RS24775 Genome accession   NZ_CP026676
Coordinates   5311051..5311452 (-) Length   133 a.a.
NCBI ID   WP_023378336.1    Uniprot ID   A0A964GGD4
Organism   Pseudomonas sp. SWI6     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5306051..5316452
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C4Q28_RS24760 (C4Q28_24760) - 5308015..5310075 (-) 2061 WP_023378339.1 methyl-accepting chemotaxis protein -
  C4Q28_RS24765 (C4Q28_24765) - 5310087..5310641 (-) 555 WP_104882260.1 chemotaxis protein CheW -
  C4Q28_RS24770 (C4Q28_24770) pilH 5310638..5311003 (-) 366 WP_023378337.1 twitching motility response regulator PilH -
  C4Q28_RS24775 (C4Q28_24775) pilG 5311051..5311452 (-) 402 WP_023378336.1 PleD family two-component system response regulator Regulator
  C4Q28_RS24780 (C4Q28_24780) gshB 5311718..5312671 (+) 954 WP_023378335.1 glutathione synthase -
  C4Q28_RS24785 (C4Q28_24785) - 5312763..5313668 (+) 906 WP_104882261.1 energy transducer TonB -
  C4Q28_RS24790 (C4Q28_24790) - 5313796..5315043 (+) 1248 WP_104882065.1 IS256 family transposase -
  C4Q28_RS24795 (C4Q28_24795) - 5315527..5316096 (+) 570 WP_023378333.1 YqgE/AlgH family protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14729.01 Da        Isoelectric Point: 6.0790

>NTDB_id=271631 C4Q28_RS24775 WP_023378336.1 5311051..5311452(-) (pilG) [Pseudomonas sp. SWI6]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALVKIVDHQPQIIFVDVLMPRLDGYQTCAVIKHNSAYRDIP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAPEQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=271631 C4Q28_RS24775 WP_023378336.1 5311051..5311452(-) (pilG) [Pseudomonas sp. SWI6]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCACGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGCGAAGC
GGGCTGCGAGGTGATCACCGCCAGCGACGGCTTCGATGCCCTGGTCAAGATCGTCGACCACCAACCGCAGATCATCTTCG
TCGATGTGTTGATGCCGCGTCTGGACGGGTATCAGACCTGCGCCGTGATCAAGCACAACAGCGCCTACAGGGACATCCCG
GTCATTCTGCTGTCGTCCCGCGATGGCCTGTTCGACAAGGCTCGCGGCCGGGTGGTCGGCTCGGACCAGTTCCTGACCAA
ACCCTTCAGCAAGGAAGAGCTGCTCGACGCGATCAGGGCGCATGTCCCTGGTTTCGCCGCGCCCGAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.667

90.226

0.647

Multiple sequence alignment