Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C4Q26_RS09610 Genome accession   NZ_CP026674
Coordinates   2026482..2026883 (-) Length   133 a.a.
NCBI ID   WP_023378336.1    Uniprot ID   A0A964GGD4
Organism   Pseudomonas sp. SWI44     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2021482..2031883
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C4Q26_RS09595 (C4Q26_09595) - 2023446..2025506 (-) 2061 WP_023378339.1 methyl-accepting chemotaxis protein -
  C4Q26_RS09600 (C4Q26_09600) - 2025518..2026072 (-) 555 WP_023378338.1 chemotaxis protein CheW -
  C4Q26_RS09605 (C4Q26_09605) pilH 2026069..2026434 (-) 366 WP_023378337.1 twitching motility response regulator PilH -
  C4Q26_RS09610 (C4Q26_09610) pilG 2026482..2026883 (-) 402 WP_023378336.1 PleD family two-component system response regulator Regulator
  C4Q26_RS09615 (C4Q26_09615) gshB 2027149..2028102 (+) 954 WP_023378335.1 glutathione synthase -
  C4Q26_RS09620 (C4Q26_09620) - 2028194..2029093 (+) 900 WP_104883030.1 energy transducer TonB -
  C4Q26_RS09625 (C4Q26_09625) - 2029581..2030150 (+) 570 WP_023378333.1 YqgE/AlgH family protein -
  C4Q26_RS09630 (C4Q26_09630) ruvX 2030150..2030575 (+) 426 WP_023378332.1 Holliday junction resolvase RuvX -
  C4Q26_RS09635 (C4Q26_09635) pyrR 2030624..2031142 (+) 519 WP_023378331.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14729.01 Da        Isoelectric Point: 6.0790

>NTDB_id=271570 C4Q26_RS09610 WP_023378336.1 2026482..2026883(-) (pilG) [Pseudomonas sp. SWI44]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALVKIVDHQPQIIFVDVLMPRLDGYQTCAVIKHNSAYRDIP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAPEQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=271570 C4Q26_RS09610 WP_023378336.1 2026482..2026883(-) (pilG) [Pseudomonas sp. SWI44]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCACGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGCGAAGC
GGGCTGCGAGGTGATCACCGCCAGCGACGGCTTCGATGCCCTGGTCAAGATCGTCGACCACCAACCGCAGATCATCTTCG
TCGATGTGTTGATGCCGCGTCTGGACGGGTATCAGACCTGCGCCGTGATCAAGCACAACAGCGCCTACAGGGACATCCCG
GTCATTCTGCTGTCGTCCCGCGATGGCCTGTTCGACAAGGCTCGCGGCCGGGTGGTCGGCTCGGACCAGTTCCTGACCAA
ACCCTTCAGCAAGGAAGAGCTGCTCGACGCGATCAGGGCGCATGTCCCTGGTTTCGCCGCGCCCGAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.667

90.226

0.647

Multiple sequence alignment