Detailed information NTG0271561

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: BL14DL4_RS21715
• Genome accession: NZ_CP026673
• Coordinates: 4164643..4165422 (+)
• Length: 259 a.a.
• NCBI ID: WP_003181756.1
• Uniprot ID: A0A1Y0YKK2
• Organism: Bacillus licheniformis strain 14ADL4
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 4159643..4170422

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BL14DL4_RS21695 (BL14DL4_04319)	trmFO	4160340..4161644 (+)	1305	WP_003181748.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
BL14DL4_RS21700 (BL14DL4_04320)	xerC	4161711..4162625 (+)	915	WP_003181750.1	tyrosine recombinase XerC	-
BL14DL4_RS21705 (BL14DL4_04321)	hslV	4162639..4163184 (+)	546	WP_003181752.1	ATP-dependent protease subunit HslV	-
BL14DL4_RS21710 (BL14DL4_04322)	hslU	4163201..4164604 (+)	1404	WP_003181754.1	HslU--HslV peptidase ATPase subunit	-
BL14DL4_RS21715 (BL14DL4_04323)	codY	4164643..4165422 (+)	780	WP_003181756.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
BL14DL4_RS21720 (BL14DL4_04325)	flgB	4165776..4166165 (+)	390	WP_003181758.1	flagellar basal body rod protein FlgB	-
BL14DL4_RS21725 (BL14DL4_04326)	flgC	4166165..4166617 (+)	453	WP_009328519.1	flagellar basal body rod protein FlgC	-
BL14DL4_RS21730 (BL14DL4_04327)	fliE	4166631..4166948 (+)	318	WP_003181764.1	flagellar hook-basal body complex protein FliE	-
BL14DL4_RS21735 (BL14DL4_04328)	fliF	4166999..4168600 (+)	1602	WP_003181766.1	flagellar basal-body MS-ring/collar protein FliF	-
BL14DL4_RS21740 (BL14DL4_04329)	fliG	4168614..4169630 (+)	1017	WP_003181768.1	flagellar motor switch protein FliG	-
BL14DL4_RS21745 (BL14DL4_04330)	fliH	4169614..4170381 (+)	768	WP_016885763.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29073.42 Da
• Isoelectric Point: 4.8196

>NTDB_id=271561 BL14DL4_RS21715 WP_003181756.1 4164643..4165422(+) (codY) [Bacillus licheniformis strain 14ADL4]
MALLQKTRKINAMLQNAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGFSINQQIENDRMKKMLEERQFPEDYTKSLF
NIPETSSNLDINSEYTAFPVENRDLFQAGLTTVVPIIGGGERLGTLILSRLQEKFEDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLMELEKLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=271561 BL14DL4_RS21715 WP_003181756.1 4164643..4165422(+) (codY) [Bacillus licheniformis strain 14ADL4]
ATGGCTTTATTACAAAAAACAAGAAAGATTAATGCAATGCTGCAAAATGCGGCAGGGAAGCCGGTTAATTTTAAAGAAAT
GGCCGAAACGCTTCGCGATGTGATTGATTCGAACATTTTCGTCGTCAGCCGCAGAGGAAAGCTTCTCGGTTTCTCGATCA
ACCAGCAGATCGAAAATGACCGGATGAAAAAAATGCTTGAAGAGCGCCAGTTTCCTGAAGATTATACAAAAAGCCTGTTC
AACATTCCGGAAACGTCATCTAACCTTGACATCAACAGCGAATACACAGCTTTCCCTGTGGAAAACCGCGATTTGTTCCA
AGCGGGTCTGACCACGGTCGTTCCGATCATCGGAGGAGGCGAAAGACTGGGCACCTTGATTCTGTCCCGCCTTCAGGAGA
AATTCGAGGATGACGATCTGATCCTTGCCGAATATGGCGCCACTGTCGTAGGAATGGAAATTCTCAGAGAGAAAGCGGAA
GAGATCGAAGAGGAAGCGCGCAGCAAAGCGGTCGTTCAAATGGCGATCAGTTCACTATCTTACAGCGAGCTTGAAGCAAT
TGAACATATTTTTGAGGAGCTTGACGGAAATGAAGGCCTGCTTGTCGCTAGTAAAATTGCAGACCGCGTCGGCATCACCC
GCTCGGTCATTGTCAACGCGCTCCGTAAACTTGAAAGCGCCGGTGTCATTGAATCAAGGTCACTAGGGATGAAAGGCACA
TACATCAAAGTGCTGAACAACAAATTTTTGATGGAGTTAGAAAAACTAAAGTCTCATTAA

Domains

Predicted by InterproScan.

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

• CodY GAF-like domain (CodY) (3-178)

3D structure

• AlphaFold DB: A0A1Y0YKK2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	94.595	100	0.946
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.451	98.456	0.467