Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BL14DL4_RS13255 | Genome accession | NZ_CP026673 |
| Coordinates | 2495605..2495895 (-) | Length | 96 a.a. |
| NCBI ID | WP_085959887.1 | Uniprot ID | - |
| Organism | Bacillus licheniformis strain 14ADL4 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2490605..2500895
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BL14DL4_RS13215 (BL14DL4_02638) | - | 2490630..2490959 (+) | 330 | WP_003178156.1 | cyclic-di-AMP receptor | - |
| BL14DL4_RS13220 (BL14DL4_02639) | - | 2490971..2491411 (+) | 441 | WP_003178158.1 | YaaR family protein | - |
| BL14DL4_RS13225 (BL14DL4_02640) | holB | 2491423..2492412 (+) | 990 | WP_003178160.1 | DNA polymerase III subunit delta' | - |
| BL14DL4_RS13230 (BL14DL4_02641) | - | 2492415..2493242 (+) | 828 | WP_003178162.1 | stage 0 sporulation family protein | - |
| BL14DL4_RS13235 (BL14DL4_02642) | yabA | 2493257..2493619 (+) | 363 | WP_003178164.1 | DNA replication initiation control protein YabA | - |
| BL14DL4_RS13240 (BL14DL4_02643) | - | 2493684..2494427 (+) | 744 | WP_003178166.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| BL14DL4_RS13245 (BL14DL4_02644) | - | 2494414..2494707 (+) | 294 | WP_003178169.1 | GIY-YIG nuclease family protein | - |
| BL14DL4_RS13250 (BL14DL4_02645) | rsmI | 2494682..2495556 (+) | 875 | Protein_2607 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BL14DL4_RS13255 (BL14DL4_02646) | abrB | 2495605..2495895 (-) | 291 | WP_085959887.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| BL14DL4_RS13260 (BL14DL4_02647) | metG | 2496403..2498391 (+) | 1989 | WP_003178175.1 | methionine--tRNA ligase | - |
| BL14DL4_RS13265 (BL14DL4_02648) | - | 2498476..2499243 (+) | 768 | WP_105179765.1 | TatD family hydrolase | - |
| BL14DL4_RS13270 (BL14DL4_02649) | - | 2499360..2500685 (+) | 1326 | WP_003178178.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10680.43 Da Isoelectric Point: 5.1848
>NTDB_id=271532 BL14DL4_RS13255 WP_085959887.1 2495605..2495895(-) (abrB) [Bacillus licheniformis strain 14ADL4]
MNMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSPEG
AEQIINEIQAQLQSQK
MNMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSPEG
AEQIINEIQAQLQSQK
Nucleotide
Download Length: 291 bp
>NTDB_id=271532 BL14DL4_RS13255 WP_085959887.1 2495605..2495895(-) (abrB) [Bacillus licheniformis strain 14ADL4]
ATGAATATGAAATCTACAGGTATTGTACGTAAAGTTGATGAACTAGGACGCGTGGTGATTCCAATCGAACTTCGCCGTAC
GCTTGGAATCGCAGAAAAAGACGCTCTTGAAATCTATGTAGATGACGAAAAAATCATCTTGAAAAAATATAAACCAAACA
TGACTTGCCAAGTTACAGGTGAGGTTTCTGATGACAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGCCCTGAAGGC
GCTGAGCAAATCATTAACGAAATTCAAGCACAACTTCAATCTCAAAAATAA
ATGAATATGAAATCTACAGGTATTGTACGTAAAGTTGATGAACTAGGACGCGTGGTGATTCCAATCGAACTTCGCCGTAC
GCTTGGAATCGCAGAAAAAGACGCTCTTGAAATCTATGTAGATGACGAAAAAATCATCTTGAAAAAATATAAACCAAACA
TGACTTGCCAAGTTACAGGTGAGGTTTCTGATGACAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGCCCTGAAGGC
GCTGAGCAAATCATTAACGAAATTCAAGCACAACTTCAATCTCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
93.75 |
100 |
0.938 |