Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   D1G35_RS09860 Genome accession   NZ_CP031838
Coordinates   1874850..1875569 (-) Length   239 a.a.
NCBI ID   WP_001217723.1    Uniprot ID   -
Organism   Staphylococcus aureus strain QD-CD9     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1869850..1880569
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D1G35_RS09840 (D1G35_09840) - 1870233..1870598 (+) 366 WP_000214070.1 truncated hemoglobin YjbI -
  D1G35_RS09845 (D1G35_09845) yjbH 1870621..1871427 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  D1G35_RS09850 (D1G35_09850) pepF 1871887..1873695 (-) 1809 WP_000082725.1 oligoendopeptidase F Regulator
  D1G35_RS09855 (D1G35_09855) coiA 1873743..1874729 (-) 987 WP_000959292.1 competence protein CoiA family protein Machinery gene
  D1G35_RS09860 (D1G35_09860) mecA 1874850..1875569 (-) 720 WP_001217723.1 adaptor protein MecA Regulator
  D1G35_RS09865 (D1G35_09865) spxA 1875940..1876335 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  D1G35_RS09870 (D1G35_09870) trpS 1876630..1877619 (+) 990 WP_031589556.1 tryptophan--tRNA ligase -
  D1G35_RS09875 (D1G35_09875) opp4C 1877661..1878542 (-) 882 WP_001180280.1 oligopeptide ABC transporter permease -
  D1G35_RS09880 (D1G35_09880) opp4B 1878554..1879516 (-) 963 WP_000239820.1 oligopeptide ABC transporter permease -
  D1G35_RS09885 (D1G35_09885) - 1879509..1880489 (-) 981 WP_000427769.1 dipeptide ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 239 a.a.        Molecular weight: 28285.17 Da        Isoelectric Point: 4.1548

>NTDB_id=271502 D1G35_RS09860 WP_001217723.1 1874850..1875569(-) (mecA) [Staphylococcus aureus strain QD-CD9]
MRIERVDDTTVKLFITYSDIEARGFSREDLWTNRKRGEEFFWSMMDEINEEEDFVVEGPLWIQVHAFEKGVEVTISKSKN
EDMMNMSDDDATDQFDEQVQELLAQTLEGEDQLEELFDQRTKEKEAQGSKRQKSSARKNTRTIIVKFNDLEDVINYAYHS
NPITTEFEDLLYMVDGTYYYAVHFDSHVDQEVINDSYSQLLEFAYPTDRTEVYLNDYAKIIMSHNVTAQVRRYFPETTE

Nucleotide


Download         Length: 720 bp        

>NTDB_id=271502 D1G35_RS09860 WP_001217723.1 1874850..1875569(-) (mecA) [Staphylococcus aureus strain QD-CD9]
ATGAGAATAGAACGAGTAGATGATACAACTGTAAAATTGTTTATAACATATAGCGATATCGAGGCCCGTGGATTTAGTCG
TGAAGATTTATGGACAAATCGCAAACGTGGCGAAGAATTCTTTTGGTCAATGATGGATGAAATTAACGAAGAAGAAGATT
TTGTTGTAGAAGGTCCATTATGGATTCAAGTACATGCCTTTGAAAAAGGTGTCGAAGTCACAATTTCTAAATCTAAAAAT
GAAGATATGATGAATATGTCTGATGATGATGCAACTGATCAATTTGATGAACAAGTTCAAGAATTGTTAGCTCAAACATT
AGAAGGTGAAGATCAATTAGAAGAATTATTCGATCAACGAACAAAAGAAAAAGAAGCTCAAGGTTCTAAACGTCAAAAGT
CTTCAGCACGTAAAAATACAAGAACAATTATTGTGAAATTTAACGATTTAGAAGATGTTATTAATTATGCATATCATAGC
AATCCAATAACTACAGAGTTTGAAGATTTGTTATATATGGTTGATGGTACTTATTATTATGCTGTACATTTTGATAGTCA
TGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGTTTATT
TAAATGACTATGCTAAAATAATTATGAGTCATAACGTAACAGCTCAAGTTCGACGTTATTTTCCAGAGACAACTGAATAA

Domains

Predicted by InterProScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-229)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

37.975

99.163

0.377

Multiple sequence alignment