Detailed information NTG0271336

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: D0819_RS18505
• Genome accession: NZ_CP031784
• Coordinates: 3545631..3546752 (+)
• Length: 373 a.a.
• NCBI ID: WP_153257221.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain HMNig-2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3540631..3551752

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D0819_RS18480 (D0819_18570)	ycdA	3540636..3541700 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
D0819_RS18485	-	3541723..3541854 (-)	132	WP_003246334.1	hypothetical protein	-
D0819_RS18490 (D0819_18575)	ycdB	3542028..3543449 (+)	1422	WP_153257218.1	YcdB/YcdC domain-containing protein	-
D0819_RS18495 (D0819_18580)	ycdC	3543636..3544997 (+)	1362	WP_153257219.1	YcdB/YcdC domain-containing protein	-
D0819_RS18500 (D0819_18585)	cwlK	3545005..3545508 (-)	504	WP_153257220.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
D0819_RS18505 (D0819_18590)	rapF	3545631..3546752 (+)	1122	WP_153257221.1	response regulator aspartate phosphatase RapJ	Regulator
D0819_RS18510 (D0819_18595)	ycdF	3546860..3547636 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
D0819_RS18515 (D0819_18600)	ycdG	3547661..3549346 (+)	1686	Protein_3608	alpha-glucosidase	-
D0819_RS18520 (D0819_18605)	znuA	3549534..3550493 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
D0819_RS18525 (D0819_18610)	znuC	3550548..3551243 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44455.37 Da
• Isoelectric Point: 4.8344

>NTDB_id=271336 D0819_RS18505 WP_153257221.1 3545631..3546752(+) (rapF) [Bacillus subtilis strain HMNig-2]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEVYDRGIKSAAEWEDDMYLTKFRLIHELYLGNGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=271336 D0819_RS18505 WP_153257221.1 3545631..3546752(+) (rapF) [Bacillus subtilis strain HMNig-2]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAACAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCATTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATATTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCAATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGTCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGGAAATACGACAAAGCAGTAGAGGTGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAACGGTGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCAGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405