Detailed information NTG0271258

Bioinformatically predicted

Overview

• Name: recX
• Type: Regulator
• Locus tag: C3766_RS13920
• Genome accession: NZ_CP026649
• Coordinates: 2760362..2761177 (-)
• Length: 271 a.a.
• NCBI ID: WP_014097358.1
• Uniprot ID: -
• Organism: Heyndrickxia coagulans strain R11
• Function: inhibit excessive RecA-mediated recombination (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	2757921..2759525	2760362..2761177	flank	837

Gene organization within MGE regions

Location: 2757921..2761177

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C3766_RS13910 (C3766_13910)	-	2757921..2759525 (-)	1605	WP_233896594.1	IS1182 family transposase	-
C3766_RS13915 (C3766_13915)	-	2760064..2760381 (-)	318	WP_035183866.1	YfhH family protein	-
C3766_RS13920 (C3766_13920)	recX	2760362..2761177 (-)	816	WP_014097358.1	recombination regulator RecX	Regulator

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 31496.19 Da
• Isoelectric Point: 7.5094

>NTDB_id=271258 C3766_RS13920 WP_014097358.1 2760362..2761177(-) (recX) [Heyndrickxia coagulans strain R11]
MPVITKISVQKNNKERYNIFLDGQYRFSVDEEVLARYQLLKGKELDELDIEAILAEDDIRKGVNTAIHFLSYRMRSEKEV
RDDLIKKEFAPEVIRSVISKLYELQYLDDAEFAASFVRTQMNTTHKGPVVIRRELQQKGIAPELVKKALEIFDADQQVEH
ALALAEKLSRQHARLSEKLLKQKVEQGLVVKGYPPEVISAAMAALHIEKDEEAEWEALLQHAEKAKRKYGRLSGYAYRQK
MKQFLYRKGFPVDLIDRYLREEEDGDGKKIQ

Nucleotide

• Length: 816 bp

>NTDB_id=271258 C3766_RS13920 WP_014097358.1 2760362..2761177(-) (recX) [Heyndrickxia coagulans strain R11]
GTGCCGGTCATTACAAAAATCTCAGTTCAAAAAAACAATAAAGAACGTTACAATATTTTTCTTGATGGACAGTACCGGTT
CAGTGTTGATGAAGAAGTGCTGGCACGGTACCAGCTTTTAAAAGGGAAGGAATTGGATGAGCTTGATATTGAAGCGATCC
TTGCCGAAGATGATATCCGGAAAGGCGTCAACACCGCTATCCATTTTCTTTCCTACCGGATGCGGTCGGAAAAAGAAGTA
CGTGATGATTTGATAAAAAAGGAATTTGCGCCGGAAGTCATCCGGAGTGTCATATCAAAGCTTTATGAATTGCAGTATTT
GGATGATGCGGAATTTGCCGCAAGTTTTGTACGAACACAAATGAATACAACACATAAAGGGCCTGTTGTCATTAGAAGGG
AACTCCAGCAAAAAGGCATTGCACCAGAGCTTGTGAAAAAGGCGCTTGAAATTTTTGATGCGGATCAGCAAGTGGAACAC
GCCCTTGCCCTTGCGGAAAAACTGTCCAGGCAGCATGCCCGGTTGTCAGAGAAGCTTTTAAAGCAAAAAGTGGAGCAGGG
GCTTGTCGTAAAAGGTTATCCACCTGAAGTGATTTCCGCTGCGATGGCGGCGCTTCATATTGAAAAGGATGAAGAAGCGG
AGTGGGAAGCCCTTCTTCAGCACGCTGAAAAAGCAAAGCGCAAATACGGTAGACTTTCGGGATATGCATACAGGCAAAAA
ATGAAGCAGTTTTTATACCGGAAAGGGTTCCCGGTTGATTTAATAGACCGCTACTTGCGAGAAGAGGAGGATGGAGATGG
AAAAAAGATACAGTGA

Domains

Predicted by InterproScan.

• RecX family (RecX_HTH2) (84-204)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recX	Bacillus subtilis subsp. subtilis str. 168	52.471	97.048	0.509