Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AZO_RS17345 Genome accession   NC_008702
Coordinates   3786655..3787041 (+) Length   128 a.a.
NCBI ID   WP_011767175.1    Uniprot ID   A1KB63
Organism   Azoarcus olearius     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3781655..3792041
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AZO_RS17320 (azo3448) pepA 3782650..3783468 (+) 819 WP_232502198.1 flocculation-associated PEP-CTERM protein PepA -
  AZO_RS17325 (azo3449) hemL 3783478..3784752 (-) 1275 WP_011767171.1 glutamate-1-semialdehyde 2,1-aminomutase -
  AZO_RS17330 (azo3450) thiE 3784828..3785448 (-) 621 WP_011767172.1 thiamine phosphate synthase -
  AZO_RS17335 (azo3451) thiD 3785441..3786283 (-) 843 WP_011767173.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  AZO_RS17340 (azo3452) - 3786422..3786574 (+) 153 WP_269147345.1 rubredoxin -
  AZO_RS17345 (azo3453) pilG 3786655..3787041 (+) 387 WP_011767175.1 twitching motility response regulator PilG Regulator
  AZO_RS17350 (azo3454) - 3787065..3787430 (+) 366 WP_011767176.1 response regulator -
  AZO_RS17355 (azo3455) - 3787438..3787950 (+) 513 WP_011767177.1 chemotaxis protein CheW -
  AZO_RS17360 (azo3456) - 3788002..3790122 (+) 2121 WP_011767178.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14033.31 Da        Isoelectric Point: 7.1333

>NTDB_id=27099 AZO_RS17345 WP_011767175.1 3786655..3787041(+) (pilG) [Azoarcus olearius]
MDLTGLKVMVIDDSNTIRRSAEIFLGQAGCQVLLAEDGFDALAKITDHHPDVIFVDIMMPRLDGYQTCALIKKNPRLSAT
PVIMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLKAVATYTGRAPA

Nucleotide


Download         Length: 387 bp        

>NTDB_id=27099 AZO_RS17345 WP_011767175.1 3786655..3787041(+) (pilG) [Azoarcus olearius]
ATGGATCTGACCGGCCTCAAGGTCATGGTCATCGATGACAGCAATACGATCCGGCGCAGCGCCGAGATCTTCCTGGGCCA
GGCCGGGTGTCAGGTCCTGCTTGCGGAAGACGGCTTCGACGCACTCGCCAAGATCACCGACCACCACCCCGATGTCATCT
TCGTCGACATCATGATGCCGCGCCTGGACGGCTACCAGACCTGCGCGCTGATCAAGAAGAACCCGCGCCTGTCAGCCACC
CCGGTCATCATGCTGTCGTCAAAGGACGGCCTCTTCGACCGCGCCCGCGGGCGCATGGTCGGGTCCGACGAGTACCTCAC
CAAGCCCTTCACGAAGGACAGCCTGCTCAAGGCGGTTGCCACCTATACCGGCCGCGCACCGGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A1KB63

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

65.574

95.313

0.625

Multiple sequence alignment