Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   C3Y93_RS11540 Genome accession   NZ_CP026616
Coordinates   2407246..2409468 (-) Length   740 a.a.
NCBI ID   WP_104852973.1    Uniprot ID   A0A2L2M0R8
Organism   Acinetobacter sp. SWBY1     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2402246..2414468
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C3Y93_RS11515 (C3Y93_11515) - 2402290..2402625 (-) 336 WP_104852968.1 chaperone modulator CbpM -
  C3Y93_RS11520 (C3Y93_11520) - 2402990..2403451 (-) 462 WP_104852969.1 DUF2147 domain-containing protein -
  C3Y93_RS11525 (C3Y93_11525) - 2403708..2404172 (-) 465 WP_104852970.1 DUF2147 domain-containing protein -
  C3Y93_RS11530 (C3Y93_11530) - 2404405..2405280 (-) 876 WP_104852971.1 Hsp33 family molecular chaperone HslO -
  C3Y93_RS11535 (C3Y93_11535) - 2405331..2407172 (-) 1842 WP_104852972.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  C3Y93_RS11540 (C3Y93_11540) priA 2407246..2409468 (-) 2223 WP_104852973.1 primosomal protein N' Machinery gene
  C3Y93_RS11545 (C3Y93_11545) gspF 2409620..2410825 (+) 1206 WP_104852974.1 type II secretion system inner membrane protein GspF -
  C3Y93_RS11550 (C3Y93_11550) gspG 2410902..2411336 (+) 435 WP_104852975.1 type II secretion system major pseudopilin GspG -
  C3Y93_RS11555 (C3Y93_11555) lnt 2411471..2413027 (-) 1557 WP_104852976.1 apolipoprotein N-acyltransferase -
  C3Y93_RS11560 (C3Y93_11560) - 2413024..2413863 (-) 840 WP_104852977.1 CBS domain-containing protein -
  C3Y93_RS11565 (C3Y93_11565) tusA 2414061..2414318 (+) 258 WP_004975955.1 sulfurtransferase TusA -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 83985.32 Da        Isoelectric Point: 8.7640

>NTDB_id=270923 C3Y93_RS11540 WP_104852973.1 2407246..2409468(-) (priA) [Acinetobacter sp. SWBY1]
MPDSTLDPQPIYRIRVAVPVYLYDCFDYMLSAAQYQQAAVGARVLVSFGRQNLVGIIVEKLALDTPINPRFKLKAITELL
DEQAILDAKVLTLLTWASQYYQFPIGEVMHSALPSLLRQAKPYNLLARTWKLLDAQAEAKIKRSEKQQEAYKILKLHPTS
TSENILNLAGIETATLKALASKEICECVLETQDFSPMPVTLAQMPLTPNPDQKKAIDSVLKVRQQYKAFLLDGLTGSGKT
EVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCHIALLHSGLNDSKRLQAWQAAQTGKASIILGTRSAIYTPL
PNLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLENCPVILGSATPSIDSYALVDQGKMQCLELNQRAGTALMPKIHL
IDLKIAKKQHGISQQLIDEMKKRLAKKEQVLVFLNRRGYAPVLICENCAWQAKCPHCDANFTLHHQPYVHLHCHHCGTIH
RKPEQCPACNHEELKPVGMGTAKVEDSLNELFPDIDVIRVDRDSTSRVGSWQKIYDRIQRSEPLILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGDVYLQSLRPDHPLLTTLVEGDYRKFAKQSLKERKAAQL
PPYRYTALIRCESKSQELNQQFLQQHAQWLREHSEQLIDIWGPIPAPMERKAGRFQAHMVLLSKDRARLHFYIRNWWQNM
LHEKPSSMKLSLDIDPQEFS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=270923 C3Y93_RS11540 WP_104852973.1 2407246..2409468(-) (priA) [Acinetobacter sp. SWBY1]
ATGCCAGATTCGACTTTAGACCCGCAGCCCATTTACCGTATTCGAGTGGCTGTACCCGTATATCTTTATGACTGCTTCGA
TTACATGCTCAGTGCAGCACAATATCAGCAAGCAGCCGTTGGCGCACGGGTGTTGGTGTCCTTTGGTCGGCAAAACTTGG
TTGGGATTATTGTCGAAAAACTGGCGCTCGACACCCCAATTAACCCACGTTTTAAACTCAAAGCCATTACCGAACTGTTA
GATGAACAAGCGATTTTAGACGCTAAAGTTTTAACTTTGTTGACATGGGCATCACAATATTACCAATTTCCCATTGGTGA
AGTGATGCACAGCGCTTTGCCAAGTTTATTACGTCAAGCCAAGCCCTATAATTTGCTGGCTCGAACTTGGAAACTGCTAG
ATGCACAGGCCGAGGCTAAAATTAAACGCTCCGAGAAACAACAAGAAGCCTATAAAATTTTAAAGCTGCATCCAACGAGT
ACTTCTGAAAATATTTTAAATTTAGCAGGCATTGAAACCGCCACCCTAAAAGCCTTAGCAAGCAAAGAAATTTGTGAATG
TGTTTTGGAAACCCAAGATTTCAGCCCAATGCCTGTCACTTTGGCACAAATGCCTTTAACGCCCAATCCCGATCAGAAAA
AAGCCATCGACAGCGTACTTAAAGTACGGCAGCAATATAAAGCTTTTTTACTAGATGGCTTAACAGGCAGCGGCAAAACG
GAAGTGTATTTGCACATCATGCATGAGGTACTAAAGCAGGGCAAACAAGTGCTGGTGTTAGTCCCAGAAATTGGACTGAC
CCCGCAAACTATCAGTCGTTTTCAGTCACGTTTTCACTGCCATATTGCCCTCTTACATTCAGGTTTAAATGATTCCAAAC
GTTTGCAGGCATGGCAGGCAGCACAAACAGGCAAAGCGTCTATTATTTTAGGCACACGCTCTGCGATTTATACTCCATTG
CCAAATTTGGGCTTGATTATTTTAGATGAAGAACACGACCTGTCTTTTAAACAACAAGAAGGTTTTCGCTATCATGCCCG
AGATGTCGCCCTTTACCGTGCCCATCTGGAAAATTGCCCTGTTATTTTAGGTTCAGCTACACCCAGTATTGACAGTTATG
CCTTGGTCGATCAAGGCAAAATGCAATGTTTGGAGCTGAATCAACGGGCAGGCACCGCGCTTATGCCTAAAATCCACCTG
ATTGACTTAAAAATTGCAAAAAAACAGCATGGCATCAGTCAACAATTGATTGATGAAATGAAAAAACGTCTGGCAAAAAA
AGAACAAGTCTTGGTGTTTTTAAACCGACGTGGCTATGCCCCAGTCCTGATTTGTGAAAATTGTGCATGGCAAGCCAAAT
GCCCACATTGTGATGCCAACTTTACCCTGCATCATCAACCTTATGTGCATTTACACTGCCACCATTGTGGGACAATTCAC
CGCAAACCTGAGCAATGCCCTGCCTGCAACCATGAAGAACTCAAACCTGTGGGCATGGGCACCGCCAAAGTGGAAGACAG
TTTAAATGAACTGTTCCCAGATATAGATGTGATTCGGGTAGATCGTGACTCAACTAGTCGTGTCGGCAGCTGGCAAAAAA
TTTATGACCGTATTCAACGCAGTGAACCCCTAATTTTACTGGGCACACAAATGCTAGCCAAAGGACATCACTTTCCTTAT
GTAACCTTGGTGGCTATTTTAGATATCGATTCAGGCTTGCTCAGTGTTGATATTCGCGCACCTGAACGTACCGCCCAACT
GATTGTGCAAGTGGCAGGACGTGCAGGGCGTGGTGAACATAAAGGCGATGTTTATTTGCAAAGTTTACGTCCTGATCATC
CTTTACTCACCACCTTGGTCGAGGGAGATTACCGCAAGTTTGCCAAACAAAGTTTAAAAGAGCGCAAAGCCGCGCAACTG
CCGCCATATCGTTATACTGCGCTGATTCGCTGTGAGTCCAAAAGTCAGGAATTAAACCAACAGTTTTTACAACAACATGC
GCAATGGCTCAGGGAACATTCCGAACAATTAATTGATATTTGGGGGCCTATTCCTGCGCCAATGGAACGTAAGGCAGGTC
GTTTCCAAGCGCACATGGTGCTATTGTCTAAAGATCGGGCGCGCTTACATTTTTATATCAGGAACTGGTGGCAAAATATG
TTGCATGAAAAGCCATCCAGCATGAAACTAAGTTTAGATATAGATCCACAAGAATTTAGCTAA

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(642-736)

Type III restriction enzyme, res subunit (ResIII)

(207-369)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2L2M0R8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

73.009

100

0.731

Multiple sequence alignment