Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | C3Y93_RS11040 | Genome accession | NZ_CP026616 |
| Coordinates | 2295802..2296128 (+) | Length | 108 a.a. |
| NCBI ID | WP_070155499.1 | Uniprot ID | A0A1E8DZH8 |
| Organism | Acinetobacter sp. SWBY1 | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2290802..2301128
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C3Y93_RS11015 (C3Y93_11015) | hemC | 2291467..2292387 (+) | 921 | WP_104853283.1 | hydroxymethylbilane synthase | - |
| C3Y93_RS11020 (C3Y93_11020) | - | 2292409..2293188 (+) | 780 | WP_104852925.1 | uroporphyrinogen-III synthase | - |
| C3Y93_RS11025 (C3Y93_11025) | - | 2293185..2294021 (+) | 837 | WP_104852926.1 | hypothetical protein | - |
| C3Y93_RS11030 (C3Y93_11030) | - | 2294022..2295215 (+) | 1194 | WP_104852927.1 | hypothetical protein | - |
| C3Y93_RS11035 (C3Y93_11035) | - | 2295225..2295656 (+) | 432 | WP_096901909.1 | acyl-CoA thioesterase | - |
| C3Y93_RS11040 (C3Y93_11040) | hns | 2295802..2296128 (+) | 327 | WP_070155499.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| C3Y93_RS11045 (C3Y93_11045) | gspN | 2296291..2297031 (+) | 741 | WP_104852928.1 | type II secretion system protein N | - |
| C3Y93_RS11050 (C3Y93_11050) | - | 2297031..2297870 (+) | 840 | WP_104852929.1 | type II secretion system protein N | - |
| C3Y93_RS11055 (C3Y93_11055) | gspD | 2297930..2300185 (+) | 2256 | WP_104852930.1 | type II secretion system secretin GspD | - |
| C3Y93_RS11060 (C3Y93_11060) | - | 2300255..2300905 (+) | 651 | WP_004975761.1 | FHA domain-containing protein | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12178.04 Da Isoelectric Point: 9.8659
>NTDB_id=270920 C3Y93_RS11040 WP_070155499.1 2295802..2296128(+) (hns) [Acinetobacter sp. SWBY1]
MMPDISNLSVEQLKRLQAEAEALIATKKDQAIEDAYNQILAIADNLGLSIEQILEVGESKRKKSPRKTVAPRYRSKTNPT
DTWTGRGKKPRWLVAELEKGAKLEDFLI
MMPDISNLSVEQLKRLQAEAEALIATKKDQAIEDAYNQILAIADNLGLSIEQILEVGESKRKKSPRKTVAPRYRSKTNPT
DTWTGRGKKPRWLVAELEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=270920 C3Y93_RS11040 WP_070155499.1 2295802..2296128(+) (hns) [Acinetobacter sp. SWBY1]
ATGATGCCTGATATTAGCAATTTGTCTGTAGAACAGTTAAAGCGTTTACAAGCTGAAGCGGAAGCATTAATTGCCACGAA
AAAAGATCAAGCAATTGAAGATGCCTATAATCAAATTTTAGCGATTGCAGACAATTTGGGTTTAAGCATTGAGCAGATTT
TGGAAGTTGGCGAAAGCAAGCGTAAGAAAAGCCCGCGTAAAACAGTAGCGCCACGTTATCGTAGCAAAACAAATCCTACA
GATACTTGGACTGGTCGTGGTAAAAAACCACGCTGGTTAGTCGCTGAATTAGAAAAAGGCGCAAAACTTGAAGATTTTCT
AATCTAA
ATGATGCCTGATATTAGCAATTTGTCTGTAGAACAGTTAAAGCGTTTACAAGCTGAAGCGGAAGCATTAATTGCCACGAA
AAAAGATCAAGCAATTGAAGATGCCTATAATCAAATTTTAGCGATTGCAGACAATTTGGGTTTAAGCATTGAGCAGATTT
TGGAAGTTGGCGAAAGCAAGCGTAAGAAAAGCCCGCGTAAAACAGTAGCGCCACGTTATCGTAGCAAAACAAATCCTACA
GATACTTGGACTGGTCGTGGTAAAAAACCACGCTGGTTAGTCGCTGAATTAGAAAAAGGCGCAAAACTTGAAGATTTTCT
AATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
75.926 |
100 |
0.759 |