Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SGO_RS07380 Genome accession   NC_009785
Coordinates   1561723..1562409 (-) Length   228 a.a.
NCBI ID   WP_008809440.1    Uniprot ID   A8AYC4
Organism   Streptococcus gordonii str. Challis substr. CH1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1556723..1567409
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGO_RS07355 (SGO_1499) - 1557497..1558276 (-) 780 WP_012130574.1 ABC transporter ATP-binding protein -
  SGO_RS11100 (SGO_1500) - 1558287..1558415 (-) 129 WP_012130575.1 hypothetical protein -
  SGO_RS07360 (SGO_1501) - 1558531..1559289 (-) 759 WP_012130576.1 TraX family protein -
  SGO_RS07365 (SGO_1502) - 1559487..1560131 (-) 645 WP_012130577.1 DUF6572 domain-containing protein -
  SGO_RS07370 (SGO_1503) - 1560156..1560713 (-) 558 WP_012130578.1 hypothetical protein -
  SGO_RS07375 (SGO_1504) - 1560759..1561739 (-) 981 WP_012130579.1 sensor histidine kinase -
  SGO_RS07380 (SGO_1505) braR 1561723..1562409 (-) 687 WP_008809440.1 response regulator transcription factor Regulator
  SGO_RS07385 (SGO_1506) - 1562619..1563878 (+) 1260 WP_012130580.1 NRAMP family divalent metal transporter -
  SGO_RS07390 (SGO_1507) - 1564002..1565186 (+) 1185 WP_012130581.1 DUF2974 domain-containing protein -
  SGO_RS07395 (SGO_1509) - 1565489..1566685 (+) 1197 WP_012130583.1 ferredoxin reductase family protein -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 26494.78 Da        Isoelectric Point: 5.0042

>NTDB_id=27079 SGO_RS07380 WP_008809440.1 1561723..1562409(-) (braR) [Streptococcus gordonii str. Challis substr. CH1]
MHKIMLVEDDPVIRQMIKKMLEQWGYQVFAVEDFMEVLSLFVKEEPQLVLMDIGLPLFNGYHWCQEIRKISTVPIMFLSS
RDQAMDIVMAINMGGDDYVTKPFDNNVFLAKVQGLLRRSYEFGTDQNLLEHRGVILNLKSMDLMYNGQVITLTKNEFQIL
RVLFERAGSIVEREDLMKELWNSDFFIDDNTLSVNVARLRKKLEETGLKNFIETKKGIGYGLTNGHTE

Nucleotide


Download         Length: 687 bp        

>NTDB_id=27079 SGO_RS07380 WP_008809440.1 1561723..1562409(-) (braR) [Streptococcus gordonii str. Challis substr. CH1]
ATGCATAAGATTATGTTAGTAGAGGATGATCCAGTCATCCGTCAAATGATTAAAAAGATGTTGGAGCAATGGGGCTATCA
AGTTTTTGCGGTTGAAGATTTTATGGAGGTTTTATCTCTTTTTGTTAAGGAGGAACCTCAGCTGGTCTTGATGGATATTG
GTCTGCCCCTCTTTAATGGCTATCATTGGTGTCAGGAGATTCGTAAGATTTCAACGGTTCCAATCATGTTTTTATCCTCA
CGTGACCAAGCCATGGATATCGTCATGGCTATCAATATGGGTGGTGATGACTACGTGACCAAGCCTTTTGATAACAATGT
TTTTCTGGCTAAGGTTCAAGGACTGTTGCGCCGCTCTTATGAGTTTGGTACAGATCAAAATCTCCTAGAACACCGAGGTG
TGATCTTAAATCTCAAGTCTATGGACTTGATGTACAATGGTCAGGTCATTACACTGACTAAGAATGAATTCCAGATTTTA
CGTGTTTTATTTGAGCGAGCAGGCAGTATAGTTGAGCGGGAAGATTTGATGAAAGAGCTATGGAACAGCGATTTCTTTAT
TGATGATAATACCCTATCTGTCAATGTTGCTAGGCTCCGGAAAAAGCTGGAAGAAACGGGTCTCAAGAACTTTATTGAGA
CGAAAAAAGGGATTGGATACGGTCTGACAAATGGACACACGGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8AYC4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

49.541

95.614

0.474

Multiple sequence alignment