Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | C3Z10_RS13440 | Genome accession | NZ_CP026610 |
| Coordinates | 2728269..2729306 (-) | Length | 345 a.a. |
| NCBI ID | WP_015417819.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain CGMCC 11640 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2723269..2734306
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C3Z10_RS13390 (C3Z10_13390) | tasA | 2723503..2724288 (-) | 786 | WP_007408329.1 | biofilm matrix protein TasA | - |
| C3Z10_RS13395 (C3Z10_13395) | sipW | 2724353..2724937 (-) | 585 | WP_015240205.1 | signal peptidase I SipW | - |
| C3Z10_RS13400 (C3Z10_13400) | tapA | 2724909..2725580 (-) | 672 | WP_031378945.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C3Z10_RS13405 (C3Z10_13405) | - | 2725839..2726168 (+) | 330 | WP_039254490.1 | DUF3889 domain-containing protein | - |
| C3Z10_RS13410 (C3Z10_13410) | - | 2726208..2726387 (-) | 180 | WP_003153093.1 | YqzE family protein | - |
| C3Z10_RS13415 (C3Z10_13415) | comGG | 2726444..2726821 (-) | 378 | WP_015417814.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| C3Z10_RS13420 (C3Z10_13420) | comGF | 2726822..2727322 (-) | 501 | WP_257738552.1 | competence type IV pilus minor pilin ComGF | - |
| C3Z10_RS13425 (C3Z10_13425) | comGE | 2727231..2727545 (-) | 315 | WP_012117982.1 | competence type IV pilus minor pilin ComGE | - |
| C3Z10_RS13430 (C3Z10_13430) | comGD | 2727529..2727966 (-) | 438 | WP_015417817.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| C3Z10_RS13435 (C3Z10_13435) | comGC | 2727956..2728264 (-) | 309 | WP_015417818.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| C3Z10_RS13440 (C3Z10_13440) | comGB | 2728269..2729306 (-) | 1038 | WP_015417819.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| C3Z10_RS13445 (C3Z10_13445) | comGA | 2729293..2730363 (-) | 1071 | WP_003153083.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| C3Z10_RS13450 (C3Z10_13450) | - | 2730556..2731506 (-) | 951 | WP_015417820.1 | magnesium transporter CorA family protein | - |
| C3Z10_RS13455 (C3Z10_13455) | - | 2731652..2732953 (+) | 1302 | WP_012117986.1 | hemolysin family protein | - |
| C3Z10_RS13460 (C3Z10_13460) | - | 2732991..2733821 (-) | 831 | WP_039254482.1 | STAS domain-containing protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39689.06 Da Isoelectric Point: 9.5935
>NTDB_id=270788 C3Z10_RS13440 WP_015417819.1 2728269..2729306(-) (comGB) [Bacillus velezensis strain CGMCC 11640]
MKRIKRTWPLKDQAAFLKRLGEMTEKGYSLIEGLRLLQLQLHKRQLAELKEGIRRLREGDAFYQVLEALSFHKEAVSICY
FAEKHGELPGAMKQSGELLQRKLMQTNQIKKMLRYPMFLIFSVCVMFYILQSLIIPQFSGIYQSMNMNTSGTTAFIFAFF
RHFHEACALALSAAFCLFLYVWFLCKKKSPQDKMLIVVKIPLLGKAAVLFNSYFFSLQLSSLLKSGLSIYDSLTAFKEQS
FLPFYREEAEMLITRLKAGETIESALSGHPCYEKDLAAAVSHGQANGLLHRELYTYSQFMMERLEQNAAKYTGILQPVIY
GVVAGMILIVYMSMLMPMYQMMNQM
MKRIKRTWPLKDQAAFLKRLGEMTEKGYSLIEGLRLLQLQLHKRQLAELKEGIRRLREGDAFYQVLEALSFHKEAVSICY
FAEKHGELPGAMKQSGELLQRKLMQTNQIKKMLRYPMFLIFSVCVMFYILQSLIIPQFSGIYQSMNMNTSGTTAFIFAFF
RHFHEACALALSAAFCLFLYVWFLCKKKSPQDKMLIVVKIPLLGKAAVLFNSYFFSLQLSSLLKSGLSIYDSLTAFKEQS
FLPFYREEAEMLITRLKAGETIESALSGHPCYEKDLAAAVSHGQANGLLHRELYTYSQFMMERLEQNAAKYTGILQPVIY
GVVAGMILIVYMSMLMPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=270788 C3Z10_RS13440 WP_015417819.1 2728269..2729306(-) (comGB) [Bacillus velezensis strain CGMCC 11640]
ATGAAGCGGATTAAACGAACATGGCCGTTGAAGGATCAAGCGGCTTTTTTGAAAAGGCTCGGTGAAATGACGGAAAAAGG
ATACAGCCTGATTGAAGGGCTCAGACTGCTGCAACTCCAGCTGCATAAACGTCAGCTTGCAGAGCTGAAGGAAGGAATCC
GCCGGCTGAGAGAAGGTGATGCGTTTTACCAAGTGCTTGAGGCACTGTCTTTTCATAAAGAAGCCGTCTCTATCTGCTAT
TTCGCGGAGAAACACGGGGAATTGCCGGGGGCGATGAAACAAAGCGGCGAATTATTACAGAGAAAGCTCATGCAGACGAA
TCAAATCAAAAAAATGCTCCGGTATCCGATGTTTTTAATTTTTTCCGTCTGTGTCATGTTTTATATCCTGCAAAGTTTAA
TTATTCCGCAGTTTTCTGGGATTTATCAATCAATGAATATGAATACGTCCGGTACGACTGCTTTCATCTTTGCGTTTTTT
CGGCATTTTCATGAAGCCTGCGCACTGGCGCTTTCCGCCGCTTTCTGCTTGTTTTTGTACGTTTGGTTCTTATGTAAGAA
AAAGTCCCCGCAAGATAAAATGCTGATTGTTGTGAAAATACCCCTCTTAGGAAAAGCGGCCGTTCTTTTTAACAGCTACT
TTTTCTCTTTACAGCTCAGCAGTCTTCTGAAATCCGGCCTTTCTATCTATGACAGCTTAACAGCTTTTAAAGAACAATCT
TTTCTGCCTTTTTATCGAGAAGAAGCAGAGATGCTCATTACACGTCTGAAAGCCGGAGAAACCATAGAATCCGCTCTTTC
TGGGCATCCGTGTTATGAAAAAGACCTTGCGGCTGCAGTCAGCCACGGACAGGCAAACGGCCTGCTTCACCGCGAACTTT
ATACGTACAGCCAGTTTATGATGGAGCGTCTTGAACAAAACGCGGCGAAGTATACCGGCATTCTCCAGCCTGTCATTTAC
GGTGTTGTGGCCGGTATGATTTTAATTGTCTACATGTCAATGCTGATGCCGATGTACCAGATGATGAACCAAATGTAA
ATGAAGCGGATTAAACGAACATGGCCGTTGAAGGATCAAGCGGCTTTTTTGAAAAGGCTCGGTGAAATGACGGAAAAAGG
ATACAGCCTGATTGAAGGGCTCAGACTGCTGCAACTCCAGCTGCATAAACGTCAGCTTGCAGAGCTGAAGGAAGGAATCC
GCCGGCTGAGAGAAGGTGATGCGTTTTACCAAGTGCTTGAGGCACTGTCTTTTCATAAAGAAGCCGTCTCTATCTGCTAT
TTCGCGGAGAAACACGGGGAATTGCCGGGGGCGATGAAACAAAGCGGCGAATTATTACAGAGAAAGCTCATGCAGACGAA
TCAAATCAAAAAAATGCTCCGGTATCCGATGTTTTTAATTTTTTCCGTCTGTGTCATGTTTTATATCCTGCAAAGTTTAA
TTATTCCGCAGTTTTCTGGGATTTATCAATCAATGAATATGAATACGTCCGGTACGACTGCTTTCATCTTTGCGTTTTTT
CGGCATTTTCATGAAGCCTGCGCACTGGCGCTTTCCGCCGCTTTCTGCTTGTTTTTGTACGTTTGGTTCTTATGTAAGAA
AAAGTCCCCGCAAGATAAAATGCTGATTGTTGTGAAAATACCCCTCTTAGGAAAAGCGGCCGTTCTTTTTAACAGCTACT
TTTTCTCTTTACAGCTCAGCAGTCTTCTGAAATCCGGCCTTTCTATCTATGACAGCTTAACAGCTTTTAAAGAACAATCT
TTTCTGCCTTTTTATCGAGAAGAAGCAGAGATGCTCATTACACGTCTGAAAGCCGGAGAAACCATAGAATCCGCTCTTTC
TGGGCATCCGTGTTATGAAAAAGACCTTGCGGCTGCAGTCAGCCACGGACAGGCAAACGGCCTGCTTCACCGCGAACTTT
ATACGTACAGCCAGTTTATGATGGAGCGTCTTGAACAAAACGCGGCGAAGTATACCGGCATTCTCCAGCCTGTCATTTAC
GGTGTTGTGGCCGGTATGATTTTAATTGTCTACATGTCAATGCTGATGCCGATGTACCAGATGATGAACCAAATGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
65.635 |
93.623 |
0.614 |