Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   C3496_RS26555 Genome accession   NZ_CP026608
Coordinates   5191560..5192306 (-) Length   248 a.a.
NCBI ID   WP_136444652.1    Uniprot ID   A0A4S4HV91
Organism   Bacillus anthracis strain HDZK-BYSB7     
Function   ssDNA annealing; plasmid transformation (predicted from homology)   
DNA processing Homologous recombination

Genomic Context

Location: 5186560..5197306
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C3496_RS26540 (C3496_27890) dnaG 5187327..5189123 (-) 1797 WP_088311958.1 DNA primase -
  C3496_RS26545 (C3496_27905) - 5189978..5190790 (-) 813 WP_000368943.1 pyruvate, water dikinase regulatory protein -
  C3496_RS26550 (C3496_27910) - 5190820..5191452 (-) 633 WP_000583759.1 helix-turn-helix transcriptional regulator -
  C3496_RS26555 (C3496_27915) recO 5191560..5192306 (-) 747 WP_136444652.1 DNA repair protein RecO Machinery gene
  C3496_RS26560 (C3496_27920) - 5192340..5192483 (-) 144 WP_000883924.1 YqzL family protein -
  C3496_RS26565 (C3496_27925) era 5192660..5193565 (-) 906 WP_001080241.1 GTPase Era -
  C3496_RS26570 (C3496_27930) - 5193558..5193956 (-) 399 WP_136444651.1 cytidine deaminase -
  C3496_RS26575 (C3496_27935) - 5194056..5194409 (-) 354 WP_000715480.1 diacylglycerol kinase family protein -
  C3496_RS26580 (C3496_27940) ybeY 5194406..5194876 (-) 471 WP_000054692.1 rRNA maturation RNase YbeY -
  C3496_RS26585 (C3496_27945) - 5194873..5197017 (-) 2145 WP_000946454.1 HD family phosphohydrolase -

Sequence

Protein


Download         Length: 248 a.a.        Molecular weight: 28586.07 Da        Isoelectric Point: 7.7551

>NTDB_id=270719 C3496_RS26555 WP_136444652.1 5191560..5192306(-) (recO) [Bacillus anthracis strain HDZK-BYSB7]
MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLIQMGSGLGTLQQGEIISTMKE
IREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLHYMCEGVDSEVLSLIYQTKMLPVLGMRPYFDTCAICHQETD
FVAFSVREGGFLCSSHAEQDQYRIPVGEAVHKLLRLFYHFDLHRLGNVSVKDSTKKQMRLVLNTYYDEYCGIYLKSRRFL
EQLDKFQI

Nucleotide


Download         Length: 747 bp        

>NTDB_id=270719 C3496_RS26555 WP_136444652.1 5191560..5192306(-) (recO) [Bacillus anthracis strain HDZK-BYSB7]
ATGTTTCAAAAAGTTGAGGGCATCGTTATCCGTACGACAGATTACGGAGAAACGAACAAGATTGTTACAATATTTTCAAG
AGAATTGGGTAAGGTAAGTGCAATGGCAAGAGGAGCGAAAAAACCGAAAAGTCGGTTAGCATCTGTTTCGCAACTTATGA
CACATGGTCATTTTCTTATTCAAATGGGATCTGGACTTGGAACTTTGCAACAAGGCGAGATTATTTCAACTATGAAAGAA
ATTCGCGAGGATATATTTTTAACTGCTTATGCATCATTTATTGTTGAATTAACTGATAAAGCAACAGAAGATAAAAAACA
TAATCCATATTTATTTGAAATGTTATATCAAACGTTGCATTATATGTGTGAGGGTGTTGATTCAGAAGTATTATCATTAA
TTTATCAAACGAAAATGCTTCCGGTATTAGGGATGCGCCCGTACTTTGACACATGTGCGATTTGTCATCAAGAAACAGAT
TTTGTCGCCTTCTCTGTTAGAGAGGGCGGTTTTCTGTGCTCAAGTCATGCTGAACAAGATCAGTATCGTATACCAGTGGG
GGAAGCTGTTCATAAATTATTGCGTCTTTTCTACCACTTCGATTTACATAGACTTGGCAATGTATCAGTGAAGGATAGCA
CAAAAAAACAAATGCGTTTAGTGTTGAATACATATTATGATGAATATTGCGGGATTTATTTGAAATCAAGACGTTTCTTA
GAACAACTTGATAAGTTTCAAATATAA

Domains

Predicted by InterproScan.

Recombination protein O N terminal (RecO_N)

(1-77)

Recombination protein O C terminal (RecO_C)

(82-238)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4S4HV91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Bacillus subtilis subsp. subtilis str. 168

54.656

99.597

0.544

Multiple sequence alignment