Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   C3496_RS25105 Genome accession   NZ_CP026608
Coordinates   4938315..4938749 (-) Length   144 a.a.
NCBI ID   WP_000811492.1    Uniprot ID   A0A0G8EA73
Organism   Bacillus anthracis strain HDZK-BYSB7     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 4933315..4943749
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C3496_RS25090 (C3496_26355) - 4934084..4934641 (+) 558 WP_000062080.1 PadR family transcriptional regulator -
  C3496_RS25095 (C3496_26365) metE 4935564..4937852 (+) 2289 WP_136444689.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  C3496_RS25100 (C3496_26370) comJ 4937889..4938278 (-) 390 WP_000424034.1 competence protein ComJ -
  C3496_RS25105 (C3496_26375) nucA/comI 4938315..4938749 (-) 435 WP_000811492.1 DNA-entry nuclease Machinery gene
  C3496_RS25110 (C3496_26385) - 4938986..4939735 (+) 750 WP_000388474.1 DUF3967 domain-containing protein -
  C3496_RS25115 (C3496_26390) kinB 4939789..4941063 (-) 1275 WP_071728341.1 sporulation sensor histidine kinase KinB -
  C3496_RS25120 (C3496_26395) - 4941373..4941573 (+) 201 WP_000929284.1 hypothetical protein -
  C3496_RS25125 (C3496_26400) - 4941697..4942860 (+) 1164 WP_000434590.1 aminotransferase A -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16012.35 Da        Isoelectric Point: 8.4331

>NTDB_id=270715 C3496_RS25105 WP_000811492.1 4938315..4938749(-) (nucA/comI) [Bacillus anthracis strain HDZK-BYSB7]
MKQLKGIIISIIAILSILVAVYEVLVPEETSTKKTNAYDQVLEFPKERYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFDVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=270715 C3496_RS25105 WP_000811492.1 4938315..4938749(-) (nucA/comI) [Bacillus anthracis strain HDZK-BYSB7]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATTGCAATTCTTTCTATTTTAGTAGCGGTTTATGAAGTACTTGTTCC
AGAGGAAACAAGTACAAAAAAAACAAATGCGTATGATCAAGTTCTAGAATTTCCGAAAGAGAGATATCCAGAAACAGGGA
AACATATTACGGATGCGATAAAGGAAGGACATTCAGAAGTTTGTACAATCGACCGTGGTGGTGCTGCGGATAGAAGAAAG
CTATCGTTAGCCCCATACCCATCAAAAAAAGGGTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGCGGAAA
AGGAGCACATATTGAATATATAAGTCCAGCAGATAATCGAGGAGCAGGGTCTTGGGTAGGAAATAAGTTAGATAAATACC
CAGATGGTACGCGTGTGAAATTTGACGTAAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-139)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0G8EA73

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

70.796

78.472

0.556

Multiple sequence alignment