Detailed information NTG0270669

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: C3Y97_RS26130
• Genome accession: NZ_CP026607
• Coordinates: 5090964..5092313 (-)
• Length: 449 a.a.
• NCBI ID: WP_000225362.1
• Uniprot ID: -
• Organism: Bacillus sp. DU-106
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5085964..5097313

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C3Y97_RS26110 (C3Y97_26815)	secA	5086289..5088796 (-)	2508	WP_000579385.1	preprotein translocase subunit SecA	-
C3Y97_RS26115 (C3Y97_26820)	raiA	5089071..5089613 (-)	543	WP_000671185.1	ribosome-associated translation inhibitor RaiA	-
C3Y97_RS26120 (C3Y97_26825)	cspC	5089936..5090133 (-)	198	WP_001990088.1	cold shock protein CspC	-
C3Y97_RS26125 (C3Y97_26830)	-	5090260..5090964 (-)	705	WP_086404136.1	ComF family protein	-
C3Y97_RS26130 (C3Y97_26835)	comFA	5090964..5092313 (-)	1350	WP_000225362.1	ATP-dependent helicase ComFA	Machinery gene
C3Y97_RS26135 (C3Y97_26840)	-	5092441..5093868 (-)	1428	WP_000499474.1	C40 family peptidase	-
C3Y97_RS26140 (C3Y97_26845)	-	5094017..5094331 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
C3Y97_RS26145 (C3Y97_26855)	-	5094504..5095346 (-)	843	WP_000684725.1	DegV family protein	-
C3Y97_RS26150 (C3Y97_26860)	-	5095583..5096218 (+)	636	WP_000926669.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51174.04 Da
• Isoelectric Point: 9.9910

>NTDB_id=270669 C3Y97_RS26130 WP_000225362.1 5090964..5092313(-) (comFA) [Bacillus sp. DU-106]
MVAGKQLLLEELSSDLQRKLNDLKKKGEIVCVQGVKKKNSKYMCQRCGNVDRRLFASFLCKRCSKVCTYCRKCITMGRVS
ECTVLVRGIAERKREKNSNLLQWNGTLSTGQNLAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVVALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVIVVDEIDAFPYCADQMLQYAVKQAM
KEKAARIYLTATPDETWKRKFRKGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLQWLKMYLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTEAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=270669 C3Y97_RS26130 WP_000225362.1 5090964..5092313(-) (comFA) [Bacillus sp. DU-106]
ATGGTAGCGGGGAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACAGAGGAAATTAAACGATTTGAAAAAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGTGGAAATGTAGATCGGCGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGAGTAAGT
GAATGTACTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGAACGGGACGTT
GTCTACTGGCCAGAATTTGGCGGCGCAAGGAGTTATAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGAACGGATGTTGTTTTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGTGGCTTTATATGG
AGGGAGTGTAGATAAAGAAAAAGATGCAGTACTAGTCGTTGCGACCACGCATCAATTATTACGTTATTATAGGGCGTTTC
ATGTCATAGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAAAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAAAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGTACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCGTATGGAGAGGTCATTTATTTTCACTATGGCAAGACAGAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.632	93.096	0.49