Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   C3Y97_RS05940 Genome accession   NZ_CP026607
Coordinates   1150035..1150211 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus sp. DU-106     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1145035..1155211
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C3Y97_RS05920 (C3Y97_06070) clpC 1145366..1147966 (+) 2601 WP_000365401.1 ATP-dependent chaperone ClpB Regulator
  C3Y97_RS05925 (C3Y97_06075) - 1148005..1148187 (-) 183 WP_001211116.1 YjzD family protein -
  C3Y97_RS05930 (C3Y97_06080) - 1148344..1149078 (+) 735 WP_000028712.1 hydrolase -
  C3Y97_RS05935 (C3Y97_06085) - 1149108..1149980 (+) 873 WP_002204825.1 NAD(P)-dependent oxidoreductase -
  C3Y97_RS05940 (C3Y97_06090) comZ 1150035..1150211 (+) 177 WP_001986215.1 ComZ family protein Regulator
  C3Y97_RS05945 (C3Y97_06095) fabH 1150601..1151533 (+) 933 WP_001100547.1 beta-ketoacyl-ACP synthase III -
  C3Y97_RS05950 (C3Y97_06100) fabF 1151565..1152803 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  C3Y97_RS05955 (C3Y97_06105) - 1152910..1153698 (+) 789 WP_000513277.1 DUF2268 domain-containing putative Zn-dependent protease -
  C3Y97_RS05960 (C3Y97_06110) - 1153842..1154588 (+) 747 WP_050252206.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=270640 C3Y97_RS05940 WP_001986215.1 1150035..1150211(+) (comZ) [Bacillus sp. DU-106]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=270640 C3Y97_RS05940 WP_001986215.1 1150035..1150211(+) (comZ) [Bacillus sp. DU-106]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAGGCCTATGAGCTCGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment