Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DXY22_RS18570 Genome accession   NZ_CP031693
Coordinates   3619069..3619764 (-) Length   231 a.a.
NCBI ID   WP_048655237.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM101393     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3614069..3624764
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXY22_RS18550 (DXY22_03655) yttA 3614497..3615242 (+) 746 Protein_3647 LMBR1 domain-containing protein -
  DXY22_RS18555 (DXY22_03656) bceB 3615279..3617219 (-) 1941 WP_015251402.1 bacitracin ABC transporter permease BceB -
  DXY22_RS18560 (DXY22_03657) bceA 3617209..3617970 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  DXY22_RS18565 (DXY22_03658) bceS 3618072..3619076 (-) 1005 WP_015251401.1 two-component sensor histidine kinase BceS -
  DXY22_RS18570 (DXY22_03659) braR 3619069..3619764 (-) 696 WP_048655237.1 two-component response regulator BceR Regulator
  DXY22_RS18575 (DXY22_03660) ytrF 3619862..3621172 (-) 1311 WP_015251399.1 ABC transporter permease YtrF -
  DXY22_RS18580 (DXY22_03661) ytrE 3621162..3621857 (-) 696 WP_160221763.1 ABC transporter ATP-binding protein YtrE -
  DXY22_RS18585 (DXY22_03662) ytrD 3621872..3622849 (-) 978 WP_032722368.1 ABC transporter permease YtrD -
  DXY22_RS18590 (DXY22_03663) ytrC 3622879..3623865 (-) 987 WP_160221764.1 ABC transporter permease YtrC -
  DXY22_RS18595 (DXY22_03664) ytrB 3623859..3624737 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26894.80 Da        Isoelectric Point: 5.3731

>NTDB_id=270599 DXY22_RS18570 WP_048655237.1 3619069..3619764(-) (braR) [Bacillus subtilis strain SRCM101393]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=270599 DXY22_RS18570 WP_048655237.1 3619069..3619764(-) (braR) [Bacillus subtilis strain SRCM101393]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGTTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCTATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACAAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGTCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377