Detailed information NTG0270323

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: CH578_RS07025
• Genome accession: NZ_CP031690
• Coordinates: 1375848..1377269 (-)
• Length: 473 a.a.
• NCBI ID: WP_005687198.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain P617-9224
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1370848..1382269

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CH578_RS07005 (CH578_07005)	pstA	1371499..1372347 (+)	849	WP_005650601.1	phosphate ABC transporter permease PstA	-
CH578_RS07010 (CH578_07010)	pstB	1372357..1373124 (+)	768	WP_005650603.1	phosphate ABC transporter ATP-binding protein PstB	-
CH578_RS07015 (CH578_07015)	phoB	1373221..1373916 (+)	696	WP_005650606.1	phosphate regulon transcriptional regulator PhoB	-
CH578_RS07020 (CH578_07020)	phoR	1373913..1375190 (+)	1278	WP_005653955.1	phosphate regulon sensor histidine kinase PhoR	-
CH578_RS07025 (CH578_07025)	sbcB	1375848..1377269 (-)	1422	WP_005687198.1	exodeoxyribonuclease I	Machinery gene
CH578_RS07030 (CH578_07030)	-	1377282..1378157 (-)	876	WP_011272627.1	hypothetical protein	-
CH578_RS07035 (CH578_07035)	-	1378161..1379069 (-)	909	WP_011272628.1	DUF5655 domain-containing protein	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 54323.71 Da
• Isoelectric Point: 5.7258

>NTDB_id=270323 CH578_RS07025 WP_005687198.1 1375848..1377269(-) (sbcB) [Haemophilus influenzae strain P617-9224]
MAKDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGKPIMFYCKQTNDYLPAPEAVMVTGITPQECNEKGLSEPEF
AANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSF
RLEKLTKANGIEHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCT
WVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSKLEERGVSSVPLKLVHINKCPILAPAKTLLPETANR
LGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKR
ILELLFHYRARHFYKTLTRAEQIKWKKYRQNKLEKSAVEFESSLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG

Nucleotide

• Length: 1422 bp

>NTDB_id=270323 CH578_RS07025 WP_005687198.1 1375848..1377269(-) (sbcB) [Haemophilus influenzae strain P617-9224]
ATGGCAAAAGATTTCAGCTTTTTTATTTACGATTATGAAAGTTTTGGTGTAAATCCAGCAACAGATCGCCCTGCGCAATT
TGCGGGTATTCGTACAGATGCTGATTTTAATATCATTGGTAAACCAATAATGTTTTATTGTAAACAAACCAACGATTATT
TACCGGCTCCTGAAGCCGTAATGGTCACAGGAATTACGCCTCAAGAATGTAATGAAAAGGGGCTTTCAGAGCCTGAATTC
GCCGCAAATATCTTAGCAGAATTTTCCCAACCCAATACTTGTGTCATGGGTTATAACAATATTCGCTATGATGATGAAAT
GACGCGTTATACGTTTTATCGTAATTTTATTGATCCTTATGAATACAGCTGGAAAAATGGGAATTCACGCTGGGATTTGT
TAGATTTAGTGCGAGCCTGTTATGCCTTGCGTCCAGAAGGAATTAATTGGGCTTATGACGATGATGGAATGCCAAGTTTC
CGCTTAGAAAAACTCACTAAAGCAAATGGTATTGAGCATGAAAATGCTCACGATGCCATGGCGGATGTATATGCAACTAT
TGCTATGGCGAAATTAATTAAAGAAAAACAGCCTAAATTATTCCAATATTTCTTTGAAAATCGCGGTAAAAAAGAAATCG
AAAAATTAGTTGATACAGGCGCAATGACACCTTTAGTGCATGTTTCTGGAATGCTAGGGAATTATCGTGGAAATTGCACT
TGGGTTGCACCTTTAGCTTGGCATCCGACAAATCAAAATGCACTCATTGTTTGTGATTTAACTGGCGATATCGATAATTT
ATTAGCCAAAAGTGCGGATGAATTACGGACAGATTTATATACCAAAAAATCTAAATTAGAAGAAAGAGGAGTTTCATCTG
TTCCGTTAAAGCTTGTGCATATCAATAAATGTCCTATTTTAGCACCAGCTAAAACTTTGTTACCAGAAACAGCAAATCGA
TTGGGTATTGATCGACAATTATGCTTGGATAATCTTGCAAAATTACGAGCATCTTTTGATATTCGTGAAAAAGTGGCGGA
TATTTTTAATGAAGAACGTCAATTTGCATCGAATGATAATGTAGAAACTGAGTTATACAATGGCTTTTTTAGCAATGCTG
ATAAAAATAATATGGCTATTTTACGTAGTTTACCTGCAGAAAAATTATCTGAACATGGTTTAGCTTTTGAAGATAAACGT
ATCCTTGAATTATTATTCCATTATCGCGCTCGTCATTTTTATAAAACCCTCACACGCGCTGAACAAATTAAATGGAAAAA
ATACCGACAGAATAAACTTGAAAAAAGTGCGGTAGAGTTTGAATCAAGTTTACAACGTTTAGCTGAGGAACATTCAGATA
ATTCTGAAAAACTATCTTTGCTACAACAAGTATATGAATATGGTATAAAATTACTAGGTTAG

Domains

Predicted by InterProScan.

• Exonuclease C-terminal (ExoI_SH3) (208-468)

• Exonuclease (RNase_T) (9-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	55.15	98.52	0.543