Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BKC06_RS02660 Genome accession   NZ_CP026568
Coordinates   533288..533698 (+) Length   136 a.a.
NCBI ID   WP_002551738.1    Uniprot ID   A0AAT9SFQ2
Organism   Pseudomonas syringae pv. syringae strain Pss9097     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 528288..538698
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKC06_RS02630 (BKC06_002630) - 528289..529293 (-) 1005 WP_103408370.1 aspartate carbamoyltransferase catalytic subunit -
  BKC06_RS02635 (BKC06_002635) pyrR 529306..529818 (-) 513 WP_003366144.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  BKC06_RS02640 (BKC06_002640) ruvX 529917..530357 (-) 441 WP_002551734.1 Holliday junction resolvase RuvX -
  BKC06_RS02645 (BKC06_002645) - 530357..530929 (-) 573 WP_011266431.1 YqgE/AlgH family protein -
  BKC06_RS02650 (BKC06_002650) - 531005..531907 (-) 903 WP_004414710.1 energy transducer TonB -
  BKC06_RS02655 (BKC06_002655) gshB 532074..533033 (-) 960 WP_003316740.1 glutathione synthase -
  BKC06_RS02660 (BKC06_002660) pilG 533288..533698 (+) 411 WP_002551738.1 twitching motility response regulator PilG Regulator
  BKC06_RS02665 (BKC06_002665) pilH 533745..534110 (+) 366 WP_003404569.1 twitching motility response regulator PilH -
  BKC06_RS02670 (BKC06_002670) - 534125..534664 (+) 540 WP_024641078.1 chemotaxis protein CheW -
  BKC06_RS02675 (BKC06_002675) - 534715..536757 (+) 2043 WP_011266434.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14943.42 Da        Isoelectric Point: 8.5283

>NTDB_id=270294 BKC06_RS02660 WP_002551738.1 533288..533698(+) (pilG) [Pseudomonas syringae pv. syringae strain Pss9097]
MEQHASALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFVAAEQHIS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=270294 BKC06_RS02660 WP_002551738.1 533288..533698(+) (pilG) [Pseudomonas syringae pv. syringae strain Pss9097]
ATGGAACAACACGCCTCCGCCCTGAAAGTCATGGTCATCGATGATTCGAAGACCATCCGCCGCACCGCCGAAACACTGCT
CAAGAACGCAGGCTGTGAAGTCATCACTGCGATAGACGGTTTCGACGCGCTGGCCAAGATTGCCGATAACCACCCGCGAA
TCATATTCGTCGATATCATGATGCCGCGTCTGGACGGTTATCAGACCTGCGCGCTGATCAAGAACAACCGGGCATTCAAG
TCGACGCCGGTCATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGGTCCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAGCGCGATCAAGGCTCATGTGCCGGGCTTCGTTGCAGCAGAACAAC
ACATATCATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

91.912

0.691

Multiple sequence alignment