Detailed information NTG0270260

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: CH582_RS06935
• Genome accession: NZ_CP031689
• Coordinates: 1380836..1382257 (-)
• Length: 473 a.a.
• NCBI ID: WP_105894148.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain P621-7028
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1375836..1387257

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CH582_RS06915 (CH582_06915)	pstA	1376395..1377243 (+)	849	WP_005650601.1	phosphate ABC transporter permease PstA	-
CH582_RS06920 (CH582_06920)	pstB	1377253..1378020 (+)	768	WP_005650603.1	phosphate ABC transporter ATP-binding protein PstB	-
CH582_RS06925 (CH582_06925)	phoB	1378117..1378812 (+)	696	WP_006996031.1	phosphate regulon transcriptional regulator PhoB	-
CH582_RS06930 (CH582_06930)	phoR	1378809..1380086 (+)	1278	WP_013527694.1	phosphate regulon sensor histidine kinase PhoR	-
CH582_RS06935 (CH582_06935)	sbcB	1380836..1382257 (-)	1422	WP_105894148.1	exodeoxyribonuclease I	Machinery gene
CH582_RS06940 (CH582_06940)	-	1382270..1383145 (-)	876	WP_048955157.1	hypothetical protein	-
CH582_RS06945 (CH582_06945)	-	1383149..1384057 (-)	909	WP_105894149.1	DUF5655 domain-containing protein	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 54449.70 Da
• Isoelectric Point: 5.2928

>NTDB_id=270260 CH582_RS06935 WP_105894148.1 1380836..1382257(-) (sbcB) [Haemophilus influenzae strain P621-7028]
MAKDFRFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGEPIMFYCKQTNDYLPAPEAVMVTGITPQECNEKGLSEPEF
AANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSF
RLEKLTKANGIEHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLIDTGAMTPLVHVSGMLGNYRGNCT
WVAPLAWHPTNQNALIVCDLTGDINNLLAKSADELRTDLYTKKSELEERGVSSVPLKLVHINKCPILAPAKTLLPETADR
LGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDNVETELYNGFFSNADKNNMAILRSLPAEKLSEHSLAFEDRR
IPELLFHYRARHFYKTLTRAEQIKWQKYRQNKLEKSAVEFQSSLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG

Nucleotide

• Length: 1422 bp

>NTDB_id=270260 CH582_RS06935 WP_105894148.1 1380836..1382257(-) (sbcB) [Haemophilus influenzae strain P621-7028]
ATGGCAAAAGATTTCAGATTTTTTATTTACGATTATGAAAGTTTTGGTGTAAATCCAGCAACAGATCGCCCTGCGCAATT
TGCGGGTATTCGTACAGATGCTGATTTTAATATCATTGGCGAACCAATAATGTTTTATTGTAAACAAACCAACGATTATT
TACCGGCTCCTGAAGCCGTAATGGTCACAGGAATTACGCCGCAAGAATGTAATGAAAAGGGGCTTTCAGAGCCTGAATTC
GCCGCAAATATCTTAGCAGAATTTTCCCAACCCAATACTTGTGTCATGGGTTATAACAATATTCGCTATGATGATGAAAT
GACGCGTTATACGTTTTATCGTAATTTTATTGATCCTTATGAATACAGCTGGAAAAATGGGAATTCACGCTGGGATTTGT
TAGATTTAGTGCGAGCCTGTTATGCCTTGCGTCCAGAAGGGATTAATTGGGCTTATGACGATGATGGAATGCCAAGTTTC
CGCTTAGAAAAACTCACTAAAGCAAATGGTATTGAGCATGAAAATGCTCACGATGCCATGGCGGATGTATATGCAACTAT
TGCTATGGCGAAATTAATTAAAGAAAAACAACCTAAATTATTCCAATATTTCTTTGAAAATCGCGGTAAAAAAGAAATCG
AAAAATTGATTGATACAGGTGCAATGACACCTTTAGTGCATGTTTCTGGAATGCTAGGGAATTATCGTGGAAATTGCACT
TGGGTTGCACCTTTAGCTTGGCATCCGACAAATCAAAATGCACTCATTGTTTGTGATTTAACTGGCGATATCAATAATTT
ATTAGCCAAAAGTGCGGATGAATTACGGACAGATTTATATACCAAAAAATCTGAATTAGAAGAAAGAGGAGTTTCATCTG
TTCCGTTAAAGCTTGTGCATATCAATAAATGTCCTATTTTAGCACCAGCTAAAACTTTGTTACCAGAAACAGCAGATCGA
TTGGGTATTGATCGACAATTATGCTTGGATAATCTTGCAAAATTACGAGCATCTTTTGATATTCGTGAAAAAGTGGCGGA
TATTTTTAATGAAGAACGTCAATTTGCATCGAATGATAATGTAGAAACTGAGTTATACAATGGCTTTTTTAGCAATGCTG
ATAAAAATAATATGGCTATTTTACGTAGTTTACCTGCAGAAAAATTATCTGAACATAGTTTAGCTTTTGAAGATAGACGT
ATCCCTGAATTATTATTCCATTATCGAGCTCGCCACTTTTATAAAACCCTCACACGCGCTGAACAAATTAAATGGCAAAA
ATACCGACAGAATAAACTTGAAAAAAGTGCGGTAGAGTTTCAATCAAGTTTACAACGTTTAGCCGAGGAACATTCAGATA
ATTCTGAAAAACTATCTTTGCTACAACAAGTATATGAATATGGTATAAAATTACTAGGTTAG

Domains

Predicted by InterProScan.

• Exonuclease C-terminal (ExoI_SH3) (208-468)

• Exonuclease (RNase_T) (9-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	55.484	98.309	0.545